PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN21228.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family NAC
Protein Properties Length: 293aa    MW: 33780.2 Da    PI: 8.4048
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN21228.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1622.3e-50101341128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                 lp+GfrFhPtdeelvv+yL+++++g+++ +  +i+e+d+yk++Pw+Lp++   +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk+v +   ++
  PIN21228.1  10 LPAGFRFHPTDEELVVHYLCRRCAGQQVGA-PIIAEIDLYKFDPWELPAMSLYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPVGK--PKT 105
                 799************************999.88***************66566899************************************98..778 PP

         NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                   +kk Lvfy g+ap+g+kt+W+mheyrl
  PIN21228.1 106 LAIKKALVFYAGKAPRGVKTNWIMHEYRL 134
                 9**************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MKGGDQQLNL PAGFRFHPTD EELVVHYLCR RCAGQQVGAP IIAEIDLYKF DPWELPAMSL  60
YGEKEWYFFS PRDRKYPNGS RPNRAAGTGY WKATGADKPV GKPKTLAIKK ALVFYAGKAP  120
RGVKTNWIMH EYRLANVDRS AGKRNNLRLD DWVLCRIYNK KGTLEKHYNV VQEAVQFSDS  180
ELEEKPKVNS LPYNGMMQAP QLLTSHRMND HMHVDTSESV PKLHTDSSSS EHVLSPEFKE  240
VQSEPKWNVF QNPLDYQLNY LDSFLNNPFG SQMQYNDQNS LFQDTFGYMQ KPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.11e-128NAC family protein