PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN21228.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | NAC | ||||||||
Protein Properties | Length: 293aa MW: 33780.2 Da PI: 8.4048 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 162 | 2.3e-50 | 10 | 134 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lp+GfrFhPtdeelvv+yL+++++g+++ + +i+e+d+yk++Pw+Lp++ +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk+v + ++ PIN21228.1 10 LPAGFRFHPTDEELVVHYLCRRCAGQQVGA-PIIAEIDLYKFDPWELPAMSLYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPVGK--PKT 105 799************************999.88***************66566899************************************98..778 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 +kk Lvfy g+ap+g+kt+W+mheyrl PIN21228.1 106 LAIKKALVFYAGKAPRGVKTNWIMHEYRL 134 9**************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 293 aa Download sequence |
MKGGDQQLNL PAGFRFHPTD EELVVHYLCR RCAGQQVGAP IIAEIDLYKF DPWELPAMSL 60 YGEKEWYFFS PRDRKYPNGS RPNRAAGTGY WKATGADKPV GKPKTLAIKK ALVFYAGKAP 120 RGVKTNWIMH EYRLANVDRS AGKRNNLRLD DWVLCRIYNK KGTLEKHYNV VQEAVQFSDS 180 ELEEKPKVNS LPYNGMMQAP QLLTSHRMND HMHVDTSESV PKLHTDSSSS EHVLSPEFKE 240 VQSEPKWNVF QNPLDYQLNY LDSFLNNPFG SQMQYNDQNS LFQDTFGYMQ KPF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 1e-128 | NAC family protein |