PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN20729.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | NAC | ||||||||
Protein Properties | Length: 236aa MW: 26868.1 Da PI: 4.9509 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 149.7 | 1.4e-46 | 4 | 135 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lp GfrF Pt+eel+++yL++k+e+k++++++vi+ vdiy+++PwdLpk +++++++w+fF++r++++ +g r++r+t+sgyWkatg+ v+s+ PIN20729.1 4 LPTGFRFYPTEEELISFYLHNKLEDKSTNINRVIPIVDIYQLDPWDLPKqcgeLCNGDTEQWFFFTPRQEREVRGGRPSRTTASGYWKATGSPSYVFSS 102 699***************************99****************645643444777*************************************** PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++++g+kk++vfykg+ap+g+kt+W m+eyr+ PIN20729.1 103 DNKVIGVKKSMVFYKGKAPTGRKTKWKMNEYRA 135 *******************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MEELPTGFRF YPTEEELISF YLHNKLEDKS TNINRVIPIV DIYQLDPWDL PKQCGELCNG 60 DTEQWFFFTP RQEREVRGGR PSRTTASGYW KATGSPSYVF SSDNKVIGVK KSMVFYKGKA 120 PTGRKTKWKM NEYRAIKEDS QTSAPKLMNE LSLCRVYIVS GSCRAFDRRP VYIGESSSSR 180 EVKITQENGE GIVGNSGMLL ERRGSSESLA SGENYDVENV GETADGLENL MEWEDF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22380.1 | 8e-87 | NAC family protein |