PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PIN20301.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
|
||||||||
Family | ZF-HD | ||||||||
Protein Properties | Length: 111aa MW: 12929.8 Da PI: 8.1684 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 45.1 | 2.4e-14 | 3 | 52 | 5 | 60 |
ZF-HD_dimer 5 rYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 Y eC k h ++Gg+ +DGC+Efm+ g kC C CHRnFHR+ v+++ PIN20301.1 3 DYAECHKSHQ-DIGGK-TDGCQEFMQI----GFRWDAKCLICRCHRNFHRKVVKYK 52 69*******5.89997.7********9....556788**************98875 PP | |||||||
2 | ZF-HD_dimer | 45.2 | 2.2e-14 | 53 | 108 | 2 | 60 |
ZF-HD_dimer 2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 ++v+Y++C k h + + vDGC+Ef+p++++ a l Ca CgC ++FHR e ++e PIN20301.1 53 TEVVYRKCHKIHDFKFRS-CVDGCQEFTPTSEQ--GAGELVCANCGCKKSFHRNEITKE 108 6899***********975.79********9444..5899***************98876 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 111 aa Download sequence |
MEDYAECHKS HQDIGGKTDG CQEFMQIGFR WDAKCLICRC HRNFHRKVVK YKTEVVYRKC 60 HKIHDFKFRS CVDGCQEFTP TSEQGAGELV CANCGCKKSF HRNEITKEVT C |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G18835.1 | 7e-10 | ZF-HD family protein |