PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PIN20171.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 208aa MW: 23362.7 Da PI: 10.187 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 42.7 | 1.3e-13 | 71 | 115 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +W+++E++++++a +++ + Wk+I + +g +t q++s+ qky PIN20171.1 71 RESWSEQEHDKFLEALHLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 115 789*****************77.*********.*************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 208 aa Download sequence |
MVSLHPNPPP GQDFTHFYSC YMDRGDPMKT PAMKRSENNS VLETSSCWNA GAGLEDPSKK 60 VRKPYTITKS RESWSEQEHD KFLEALHLFD RDWKKIEAFV GSKTVIQIRS HAQKYFLKVQ 120 KNGTSEHVPP PRPKRKAAHP YPQKAPKNVA SQPKGPLPLA TPLDPRHTMQ PELMPVPVNT 180 MGSGSLYPWT HNAVPAGSVS HISKGMFL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G52660.2 | 1e-47 | MYB_related family protein |