PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN20047.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family NAC
Protein Properties Length: 319aa    MW: 36408.7 Da    PI: 7.062
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN20047.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM167.54.5e-5291381128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                 +ppGfrFhPt+eel+ +yL+kkv+ ++++l +vi+evd++k+ePwdL++  ++ +  ++ewy Fs++dkky+tg+r+nrat +g+Wkatg+dk+++ ++
  PIN20047.1   9 VPPGFRFHPTEEELLYYYLRKKVSYEPIDL-DVIREVDLNKLEPWDLKEkcRIGSgPQNEWYLFSHNDKKYPTGTRTNRATVAGFWKATGRDKPIHLTS 106
                 69****************************.9***************952444443456**************************************** PP

         NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                 ++ +g++ktLvfy+grap+g+ktdW+mheyrl
  PIN20047.1 107 SKRIGMRKTLVFYTGRAPHGQKTDWIMHEYRL 138
                 ******************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MAGNGEISVP PGFRFHPTEE ELLYYYLRKK VSYEPIDLDV IREVDLNKLE PWDLKEKCRI  60
GSGPQNEWYL FSHNDKKYPT GTRTNRATVA GFWKATGRDK PIHLTSSKRI GMRKTLVFYT  120
GRAPHGQKTD WIMHEYRLDD NNAEIQEDGW VVCRVFKKKN HTRGFNPEFD QENPNLLTLN  180
DSSLNYKHNS DLPQCNYYTL FDHNNSMHLP QLLSSDAVPN SFLSSLPLAA MDLQSSQNLL  240
RLTTGGAGPS GCGDGGGIVQ PEKFSGDWSF LDKLLATHQN TDQIGKSQQF TQVNDLIPSA  300
QRFSFPYQGF EPDFSRYSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79580.11e-119NAC family protein