PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN20012.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family G2-like
Protein Properties Length: 223aa    MW: 25560.2 Da    PI: 8.0718
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN20012.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like31.92.9e-102651126
     G2-like  1 kprlrWtpeLHerFveaveqLGGsek 26
                k+r+rWt++LH+rFve+v++L G++ 
  PIN20012.1 26 KTRIRWTQDLHDRFVECVKRLSGPDT 51
                68*********************985 PP
2Myb_DNA-binding22.33e-073055330
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIart 30
                     rWT+++++++v++vk+l g+  +tI r+
       PIN20012.1 30 RWTQDLHDRFVECVKRLSGP--DTICRC 55
                     9****************976..555443 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MAYFPHMKQL GGSLSTSIAT PVSSSKTRIR WTQDLHDRFV ECVKRLSGPD TICRCKIDLS  60
LIPVCCLNFR ILNQCLLCHK YRNAKYVPES VEGRSEKKSS TTDVAEVDIE AHIFKIVIMF  120
LQLVRSGMQL GEALQLQLDI QRRLHDQLES ERKLQLRIEE RAQQLKMMFE QQQKTRRNLP  180
KSTHSDSKRA NNSNPTLEDS EVTVSEGSED DTVFPQGAEH QSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.11e-39G2-like family protein