PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN20011.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

G2-like

Protein Properties

Length: 359aa MW: 40554.6 Da PI: 6.6344

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN20011.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99.2	2.8e-31	187	241	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k r+rWt++LH+rFve+v++LGG++kAtPk+il+lm+ kgLt+ h+kSHLQkYR PIN20011.1 187 KMRIRWTQDLHDRFVECVKRLGGPDKATPKAILKLMETKGLTILHIKSHLQKYRN 241 67****************************************************6 PP
2	Myb_DNA-binding	55	1.9e-17	191	240	3	48
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rWT+++++++v++vk+lGg+ t+k+I + m kg+t ++ks++qky+ PIN20011.1 191 RWTQDLHDRFVECVKRLGGPdkaTPKAILKLMEtKGLTILHIKSHLQKYR 240 9************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MKRIQNSYCF VDDFVSQYPN YFPGNVGIQI STASGNGLQK QNSWPDTSSG PIISRSGSSS 60 SAFDATEVYM GVSGYDFQEN NISDCSLPYF KNTNQSVPSF PQITTPDVGS YRINPFICFS 120 EREQLLQIKD KLLGDLEDSN SKTPSLPSDA NQNLRTLEDP YTAHFPHMKQ VGGTLPTNIA 180 TPLSSSKMRI RWTQDLHDRF VECVKRLGGP DKATPKAILK LMETKGLTIL HIKSHLQKYR 240 NAKYVPESVE GRSEKKSNTT HDVAEIDIET GMQLREALQL QLDVQMRLHE QLEIQRKLQL 300 RIEEQAKQLK MMFEQQQKTR RNLMKSTNSD SKRANNSSPT LEDSEVMVSE GSDDDAVFP

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MKRIQNSYCF VDDFVSQYPN YFPGNVGIQI STASGNGLQK QNSWPDTSSG PIISRSGSSS  60
SAFDATEVYM GVSGYDFQEN NISDCSLPYF KNTNQSVPSF PQITTPDVGS YRINPFICFS  120
EREQLLQIKD KLLGDLEDSN SKTPSLPSDA NQNLRTLEDP YTAHFPHMKQ VGGTLPTNIA  180
TPLSSSKMRI RWTQDLHDRF VECVKRLGGP DKATPKAILK LMETKGLTIL HIKSHLQKYR  240
NAKYVPESVE GRSEKKSNTT HDVAEIDIET GMQLREALQL QLDVQMRLHE QLEIQRKLQL  300
RIEEQAKQLK MMFEQQQKTR RNLMKSTNSD SKRANNSSPT LEDSEVMVSE GSDDDAVFP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06800.1	5e-65	G2-like family protein