PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN19917.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | NF-YB | ||||||||
Protein Properties | Length: 256aa MW: 28916.6 Da PI: 6.2875 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 179.8 | 2.3e-56 | 92 | 187 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 +eqdrflPianv+rimkkv+P+n+kiskdaketvqecvsefisfvt+easdkcqrekrktingdd+lwa++tlGfedyv+plk+yl+kyrelegek PIN19917.1 92 KEQDRFLPIANVGRIMKKVIPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDILWAITTLGFEDYVNPLKLYLTKYRELEGEK 187 89*******************************************************************************************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MKRERDNIED DERPQTGPNK TNFRTNPENT YSKINNINNN NNNIIIPPTN INNNNNVSNA 60 NASSNTNANR STGTGTSTAT ADNNSNNNNN NKEQDRFLPI ANVGRIMKKV IPGNGKISKD 120 AKETVQECVS EFISFVTGEA SDKCQREKRK TINGDDILWA ITTLGFEDYV NPLKLYLTKY 180 RELEGEKLNV PKQQRGEQRL QHEQTSCVPY NNVYSSTNMM SQPSFVSNDS PFPLNFSQNP 240 MQAPSLSQQD HVDEHW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G13570.1 | 1e-64 | NF-YB family protein |