PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN19672.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | bHLH | ||||||||
Protein Properties | Length: 159aa MW: 17861.7 Da PI: 9.7747 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 14.5 | 6.7e-05 | 88 | 127 | 19 | 54 |
HHHHHHCTSCC.C......TTS-STCHHHHHHHHHHHHHH CS HLH 19 afeeLrellPk.as...kapskKlsKaeiLekAveYIksL 54 ++L +llP+ + +s K s +L+++++YI++L PIN19672.1 88 LVSKLHQLLPEiRNsssTRRSSKTSANKVLQETCNYIRNL 127 568999****987788888899999999**********99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence |
MHTLITTFSL YISSNNLLRV CVGVGVCVCV LTLYLVKKYS SGFSLCTHKL SHSSPKLYFN 60 ILRMSGRRSR QLPSGSSSRI TDDQIIELVS KLHQLLPEIR NSSSTRRSSK TSANKVLQET 120 CNYIRNLHKE MDDLSERLSQ LLSTIDADSP EAAIIRTLI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G28857.1 | 3e-34 | bHLH family protein |