PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN19486.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

G2-like

Protein Properties

Length: 362aa MW: 40675.8 Da PI: 6.9074

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN19486.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.5	1.5e-33	42	96	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wtp+LHerF+eav+qLGG+ekAtPk++l+lm+++gLtl+h+kSHLQkYRl PIN19486.1 42 KPRLKWTPDLHERFIEAVNQLGGAEKATPKSVLKLMGIQGLTLYHLKSHLQKYRL 96 79****************************************************8 PP
2	Myb_DNA-binding	62.9	6.5e-20	44	95	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT++++e++++av+qlGg t+k++ + mg +g+tl+++ks++qky+ PIN19486.1 44 RLKWTPDLHERFIEAVNQLGGAekaTPKSVLKLMGiQGLTLYHLKSHLQKYR 95 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MYHHQHQGKN IQPSTRMSER QLLLQGENGT GDSGLVLSTD AKPRLKWTPD LHERFIEAVN 60 QLGGAEKATP KSVLKLMGIQ GLTLYHLKSH LQKYRLSKNL HGQANSGSNK AAAGDRISGV 120 NVSQMSNQNT ATQTTKNMHL GEAIQMHIEV QRRLHEQLEV QRHLQLRIEA QGKYLQSVLE 180 KAEETLGGQN LGTIGLEAAK IQLSDLVSKV STQCLNSTFS EMKQLSDLCL QQKQAIQLPY 240 SLSDSRLNSC EGSELYNNIM GLNFRAQMDD DNQIRQQKQS NLSMSIGLEG CQWNSGQDYG 300 EERLKGKFFD ENNVVSDDFA KMEKEKTTSE MKLPFFTTKL DLNAEEDKDS CKQLDLNGFS 360 WS

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MYHHQHQGKN IQPSTRMSER QLLLQGENGT GDSGLVLSTD AKPRLKWTPD LHERFIEAVN  60
QLGGAEKATP KSVLKLMGIQ GLTLYHLKSH LQKYRLSKNL HGQANSGSNK AAAGDRISGV  120
NVSQMSNQNT ATQTTKNMHL GEAIQMHIEV QRRLHEQLEV QRHLQLRIEA QGKYLQSVLE  180
KAEETLGGQN LGTIGLEAAK IQLSDLVSKV STQCLNSTFS EMKQLSDLCL QQKQAIQLPY  240
SLSDSRLNSC EGSELYNNIM GLNFRAQMDD DNQIRQQKQS NLSMSIGLEG CQWNSGQDYG  300
EERLKGKFFD ENNVVSDDFA KMEKEKTTSE MKLPFFTTKL DLNAEEDKDS CKQLDLNGFS  360
WS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	1e-109	G2-like family protein