PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN19438.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family HD-ZIP
Protein Properties Length: 715aa    MW: 79832.7 Da    PI: 6.8402
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN19438.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox628.9e-202580156
                TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                +++ +++t++q+++Le++F+++++p++++r  L+++lgL  rq+k+WFqNrR+++k
  PIN19438.1 25 KKRYHRHTAHQIQRLEAMFKECPHPDEKTRNLLSRELGLHPRQIKFWFQNRRTQMK 80
                678899***********************************************998 PP
2START179.71.7e-562284502206
                 HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEEC CS
       START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevis 86 
                 +a  a++el+++ +++ep+W++s     e++n + + + f++ ++       ++e++r+sgvv+m+   l   ++d + +W e ++    +a t+evis
  PIN19438.1 228 IAANAMNELIRLLQSNEPLWMRSTtdgrEMLNLESYESMFPRPNShlknpnIRIETSRDSGVVIMNGLALIDMFMDAN-KWVELFPtivsRARTIEVIS 325
                 67889*******************99999999999999999988899**999**************************.******99999********* PP

                 TT...EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXX.HHH CS
       START  87 sg...galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlp.hwl 180
                 sg   g+lqlm+ e q+ls +vp R f+f+R ++q ++g+wvivdvS d + +  + ss+ +a++lpSg+li++++ng+skvtwveh+++++r p h l
  PIN19438.1 326 SGiqsGTLQLMYEEIQVLSAMVPtRQFYFLRLCQQIEQGSWVIVDVSYDIPHQEAQFSSSYKAHRLPSGCLIQEMPNGYSKVTWVEHWEVEDRAPiHRL 424
                 ************************************************9999988899999************************************** PP

                 HHHHHHHHHHHHHHHHHHHTXXXXXX CS
       START 181 lrslvksglaegaktwvatlqrqcek 206
                 +r l++sgla+ga +w++tlqr ce+
  PIN19438.1 425 YRDLIHSGLAFGAERWLSTLQRVCER 450
                 ************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 715 aa     Download sequence    
MEFSRGGGSS GGDHHEASDP HDRRKKRYHR HTAHQIQRLE AMFKECPHPD EKTRNLLSRE  60
LGLHPRQIKF WFQNRRTQMK AQHERADNCT LRAENDKIRC ENIAIREALK NVICPSCGGP  120
PVSENSYFDE QKLRMENGQL KEELDKVSRI AAKYIGRPIS QLPPVQPIQV SSLDLSMASF  180
GGHHGINPGP SLDLDLDLLP GSSSKVIPNL AFPHMSISEM DKSLMADIAA NAMNELIRLL  240
QSNEPLWMRS TTDGREMLNL ESYESMFPRP NSHLKNPNIR IETSRDSGVV IMNGLALIDM  300
FMDANKWVEL FPTIVSRART IEVISSGIQS GTLQLMYEEI QVLSAMVPTR QFYFLRLCQQ  360
IEQGSWVIVD VSYDIPHQEA QFSSSYKAHR LPSGCLIQEM PNGYSKVTWV EHWEVEDRAP  420
IHRLYRDLIH SGLAFGAERW LSTLQRVCER FACLMVTANS SRDLGGVISS PEGKRSMMKL  480
AQRMVRNFCS SINPPNGQQW TTLSGLNEFE IRATLHRSTD PGQPNGVVLS AAATIWLPIP  540
PQTVFNFFRD ERTRPQWDVL SNQNPVQEVA HIANGSHPGN CISVLRAFNT SQNNMLILQE  600
SCIDSSGSLV VYCPVDLPAI NIAMSGEDPS YIPLLPSGFT ITSDARPDHL QASGTDGAST  660
SSNLDSTGSL ITVVFQILVS NLPTARMSPE SVATVNNLIG NTIHQIKSAL NCTTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.10.0HD-ZIP family protein