PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN19302.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family NAC
Protein Properties Length: 237aa    MW: 26786.6 Da    PI: 4.7607
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN19302.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM109.73.3e-34151391127
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97 
                 lppGfrF+Ptdee+v  yL++k+ +++l++   i+++ +i++++Pw+Lp +    e++ yfFs+++ ++    r+   t+sgyWk+tg+ k++ ++ ++
  PIN19302.1  15 LPPGFRFEPTDEEIVFLYLARKTFSNPLPA-VLIPDIdNILSFDPWELPGN---LEEDRYFFSNKEDNN----RSGTGTRSGYWKSTGSVKRISCSkTT 105
                 79*************************999.67999978**********54...45789****998865....55666889************997466 PP

         NAM  98 elvglkktLvfy....kgrapkgektdWvmheyr 127
                 + vg++k++vfy    +++ +++++tdW+mhey 
  PIN19302.1 106 AIVGIRKSFVFYkvgkHENGRRAVRTDWIMHEYY 139
                 67**********5443244555679********7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MEKFMSVVGD GVSKLPPGFR FEPTDEEIVF LYLARKTFSN PLPAVLIPDI DNILSFDPWE  60
LPGNLEEDRY FFSNKEDNNR SGTGTRSGYW KSTGSVKRIS CSKTTAIVGI RKSFVFYKVG  120
KHENGRRAVR TDWIMHEYYI ALSENTANND TTINQMNVNS QGSLVRIGNW TLCHIFLEKT  180
STKTQVDEDD NYKNRSYDLI TEDLSDTDSC SASSSSAQYY SDSSIFTDKD EVSSSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.13e-50NAC family protein