PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN19302.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | NAC | ||||||||
Protein Properties | Length: 237aa MW: 26786.6 Da PI: 4.7607 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 109.7 | 3.3e-34 | 15 | 139 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97 lppGfrF+Ptdee+v yL++k+ +++l++ i+++ +i++++Pw+Lp + e++ yfFs+++ ++ r+ t+sgyWk+tg+ k++ ++ ++ PIN19302.1 15 LPPGFRFEPTDEEIVFLYLARKTFSNPLPA-VLIPDIdNILSFDPWELPGN---LEEDRYFFSNKEDNN----RSGTGTRSGYWKSTGSVKRISCSkTT 105 79*************************999.67999978**********54...45789****998865....55666889************997466 PP NAM 98 elvglkktLvfy....kgrapkgektdWvmheyr 127 + vg++k++vfy +++ +++++tdW+mhey PIN19302.1 106 AIVGIRKSFVFYkvgkHENGRRAVRTDWIMHEYY 139 67**********5443244555679********7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MEKFMSVVGD GVSKLPPGFR FEPTDEEIVF LYLARKTFSN PLPAVLIPDI DNILSFDPWE 60 LPGNLEEDRY FFSNKEDNNR SGTGTRSGYW KSTGSVKRIS CSKTTAIVGI RKSFVFYKVG 120 KHENGRRAVR TDWIMHEYYI ALSENTANND TTINQMNVNS QGSLVRIGNW TLCHIFLEKT 180 STKTQVDEDD NYKNRSYDLI TEDLSDTDSC SASSSSAQYY SDSSIFTDKD EVSSSSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 3e-50 | NAC family protein |