PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN18993.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

YABBY

Protein Properties

Length: 212aa MW: 24035.5 Da PI: 6.9208

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN18993.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	181.1	6.2e-56	9	172	5	168
YABBY 5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakas....qllaaeshldeslkeelleelkveeenlksnvekeesastsvsse 99 + +q+CyvqC+fCntil+vsvP +sl++vvtvrCGhC s+lsvn++ka +l ++ ++ + ++ + e ++ v +++ a+t +s PIN18993.1 9 DLQDQICYVQCGFCNTILLVSVPCSSLSMVVTVRCGHCNSILSVNMMKAClvplHLFSSLNQ-------HEEMTQPKWEARPEEVVAEKKGANTCFPSV 100 6789***************************************99987433344444443.......222222222233333444444444445554 PP YABBY 100 kl..senedeevprvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihf 168 + +e+e+e++ + + + +PP k+qr+Psayn fikeei+r+k + P+++h++afs+aaknWah P+ + PIN18993.1 101 CFssDEEEHEDTVHFNQaIHKPPVKKQRAPSAYNHFIKEEIKRLKIEYPNMTHKQAFSTAAKNWAHCPQSQY 172 44224555566677777588**********************************************9765 PP

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence
MSALDNFLDL QDQICYVQCG FCNTILLVSV PCSSLSMVVT VRCGHCNSIL SVNMMKACLV 60 PLHLFSSLNQ HEEMTQPKWE ARPEEVVAEK KGANTCFPSV CFSSDEEEHE DTVHFNQAIH 120 KPPVKKQRAP SAYNHFIKEE IKRLKIEYPN MTHKQAFSTA AKNWAHCPQS QYKGGEKMVM 180 HSDVDNEEHC FGNGFHETKA LRQAICAKTP LY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23420.1	5e-59	YABBY family protein