PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN18925.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

CAMTA

Protein Properties

Length: 999aa MW: 111871 Da PI: 4.7373

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN18925.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	183.4	2.5e-57	341	457	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcyw 100 l+ ++rwl++ ei++iL+n++k+ +++e++trp sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+he+LK g+v+vl+cyYah+e+n++fqrr+yw PIN18925.1 341 LEAQHRWLRPAEICEILQNYKKFCISSEPPTRPASGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGEDNENFQRRSYW 439 5679********************************************************************************************* PP CG-1 101 lLeeelekivlvhylevk 118 +Leeel++ivlvhy+evk PIN18925.1 440 MLEEELSHIVLVHYREVK 457 *************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 999 aa Download sequence
MTMIPGKENE LQARVFTDVS SKRQEFGSNS YTLVNSQASD HDSLNKSNFS MDQMSDENLN 60 LGQNMYFLPP NQPQSYGLVT NLDVVNGAEL WETVGLCNPS LSKQNTHPTQ NDLLVQALNS 120 VRSSSKSETD VKLYAEDKTD YPALKSRLLG DVLQEGRKMV DSFGCWISEE QGDVQPMEPS 180 SGTFCEIVRS ENGDDFGIST QVTLGCHILG PSLSQDQLFS IIEISPKWGY SGSEIKVHVI 240 GRFLGSQEEV KKYKWTCMFG ELEVPAEIVV DGVLRCHTPL HETGRVPFYI TCSNRLACSE 300 VREFEFRSSS AASRFQSYGG MMAESRHYAL NAQLDIDQIL LEAQHRWLRP AEICEILQNY 360 KKFCISSEPP TRPASGSLFL FDRKVLRYFR KDGHNWRKKK DGKTVKEAHE RLKAGSVDVL 420 HCYYAHGEDN ENFQRRSYWM LEEELSHIVL VHYREVKGNR TNFNRIRDAN GIPDSRQTEE 480 DISTSEVDSS AASRFQSYDY QRASQVTDTT SLNSTQASER EDSQLAYRHQ ASPGFQSIHE 540 LPSPAEIGSV PYYPVPISDN YQGHFAVIPG MSFGSLTQEK KIKNPTDDSL TYELHQDLEF 600 SDCENVVESS NAGYQSVNFQ PSLPSTQLSA MSTLPGEGNE LVDEVFTGFR KRQEIGAHSD 660 GVEDFQASDC DSLNKSKWPV DQKSDDNMDL RLNAYYPPLS QPQLYDLPTK LDDVNQVNQV 720 ELFETAGLHN PYLTEQSRHP TQNDIKLQAL NSVGSTSKSE SNVKLNVEDK TNHPALKQPL 780 LGGVLREGLK KLDSFDRWMS KELGDVESTT QPTTGAYWET VGSDDGDDSG ISPQVTLDNY 840 ILGPSLSQDQ LFSIVDFTPN WAYSGSAVKM LVMGKFLRIQ EEVEKCKWAC MFGELEVPAE 900 IVADGVLQCH TPLHEMGRVS FYITCSNRLA CSEVREFEFR SSSVQDVDIG DVGSITSYET 960 LLHMRFGKLL SLGSNTPPAS VQCSSAETSK LCGKICALL

Sequence ? help Back to Top

Protein Sequence Length: 999 aa Download sequence

MTMIPGKENE LQARVFTDVS SKRQEFGSNS YTLVNSQASD HDSLNKSNFS MDQMSDENLN  60
LGQNMYFLPP NQPQSYGLVT NLDVVNGAEL WETVGLCNPS LSKQNTHPTQ NDLLVQALNS  120
VRSSSKSETD VKLYAEDKTD YPALKSRLLG DVLQEGRKMV DSFGCWISEE QGDVQPMEPS  180
SGTFCEIVRS ENGDDFGIST QVTLGCHILG PSLSQDQLFS IIEISPKWGY SGSEIKVHVI  240
GRFLGSQEEV KKYKWTCMFG ELEVPAEIVV DGVLRCHTPL HETGRVPFYI TCSNRLACSE  300
VREFEFRSSS AASRFQSYGG MMAESRHYAL NAQLDIDQIL LEAQHRWLRP AEICEILQNY  360
KKFCISSEPP TRPASGSLFL FDRKVLRYFR KDGHNWRKKK DGKTVKEAHE RLKAGSVDVL  420
HCYYAHGEDN ENFQRRSYWM LEEELSHIVL VHYREVKGNR TNFNRIRDAN GIPDSRQTEE  480
DISTSEVDSS AASRFQSYDY QRASQVTDTT SLNSTQASER EDSQLAYRHQ ASPGFQSIHE  540
LPSPAEIGSV PYYPVPISDN YQGHFAVIPG MSFGSLTQEK KIKNPTDDSL TYELHQDLEF  600
SDCENVVESS NAGYQSVNFQ PSLPSTQLSA MSTLPGEGNE LVDEVFTGFR KRQEIGAHSD  660
GVEDFQASDC DSLNKSKWPV DQKSDDNMDL RLNAYYPPLS QPQLYDLPTK LDDVNQVNQV  720
ELFETAGLHN PYLTEQSRHP TQNDIKLQAL NSVGSTSKSE SNVKLNVEDK TNHPALKQPL  780
LGGVLREGLK KLDSFDRWMS KELGDVESTT QPTTGAYWET VGSDDGDDSG ISPQVTLDNY  840
ILGPSLSQDQ LFSIVDFTPN WAYSGSAVKM LVMGKFLRIQ EEVEKCKWAC MFGELEVPAE  900
IVADGVLQCH TPLHEMGRVS FYITCSNRLA CSEVREFEFR SSSVQDVDIG DVGSITSYET  960
LLHMRFGKLL SLGSNTPPAS VQCSSAETSK LCGKICALL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	2e-90	CAMTA family protein