PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN18730.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family Trihelix
Protein Properties Length: 327aa    MW: 37138.2 Da    PI: 10.1429
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN18730.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix58.41.9e-1840128186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergf..erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +Wt +e+ aLi+a+re++ +++rg+l++ +W+e ++ + ++ ++   ++++qC++k+e+l+kry+   +++  r   + s++++f+++e
  PIN18730.1  40 CWTLEETVALIDAYREKWYSVNRGNLRASHWQEMADEVaSRCPVspPKTAVQCRHKMEKLRKRYRGKVQRAAARGVVRCSSWAHFQNME 128
                 7*************************************5333444489*****************9999999997778889******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MAMILRPSSH SPNDEDDRNI PTAEVAFPFA SLSRRLPPPC WTLEETVALI DAYREKWYSV  60
NRGNLRASHW QEMADEVASR CPVSPPKTAV QCRHKMEKLR KRYRGKVQRA AARGVVRCSS  120
WAHFQNMESM EKGPNNTSPS SSTSEEEDDR KNSIRRINEL YNHSNIQKGL FSNQGDFING  180
IAPGFRIKIP GGAPPAPTKV YGKFNRMDGQ NPNNSNPRFP NSIANGYGAA SNKDLRDRLI  240
ERDEKRNRVG GISKKNKVDT GVDEVVAAIH ALREGFMRIE KAKMDMTIQI EEMRMEMELK  300
KAESQQMLVE TLAKAIYENS CKKPRRM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.14e-53Trihelix family protein