PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN18270.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NAC

Protein Properties

Length: 463aa MW: 52098.8 Da PI: 6.8492

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN18270.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	116.4	2.9e-36	48	190	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......lelee.vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk........sgyW 83 lp+G++F+Ptd+el+ e+L++kvegk+ ++++ +i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+++ + +W PIN18270.1 48 LPAGVKFDPTDQELI-EHLEAKVEGKEskshplIDEFIpTIEGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKIQtecdlqggETRW 144 799**********.99*****6665443333333666646******.555666799***************73334555544778 PP NAM 84 katgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 ++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l PIN18270.1 145 HKTGKTRPVMV-NGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 190 *********.999*******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence
MNKSTSQAGS VSSSDLIDAK LEEHQLCGSK HCPGCGHKLE GKPDWVGLPA GVKFDPTDQE 60 LIEHLEAKVE GKESKSHPLI DEFIPTIEGE DGICYTHPEK LPGVTRDGLS RHFFHRPSKA 120 YTTGTRKRRK IQTECDLQGG ETRWHKTGKT RPVMVNGKQK GCKKILVLYT NFGKNRKPEK 180 TNWVMHQYHL GQHEEEKEGE LVVSKIFYQT QPRQCNWSSE KTTTTAAMTA LNNPSSSDPR 240 RDQGSSSKDQ IIPQTDDFSS MNLAAPPISS NYTAIDHIQQ LKQDHFSFLP FRKSFDEAGN 300 IGEASIAREG GGACEEREMG QHHVSHEHDI PQHHVTHEHH HHASTHQMAA TAFHISRPSH 360 SISTIISPPP LHHNSINILD QDHTFHVPRI MLPNENFQQQ QQQQSQQHHK LGGRSASGLE 420 ELIMGCTSSN DIKEESAMGM QQEAEWLKYS SFWPDPDNPD HHG

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence

MNKSTSQAGS VSSSDLIDAK LEEHQLCGSK HCPGCGHKLE GKPDWVGLPA GVKFDPTDQE  60
LIEHLEAKVE GKESKSHPLI DEFIPTIEGE DGICYTHPEK LPGVTRDGLS RHFFHRPSKA  120
YTTGTRKRRK IQTECDLQGG ETRWHKTGKT RPVMVNGKQK GCKKILVLYT NFGKNRKPEK  180
TNWVMHQYHL GQHEEEKEGE LVVSKIFYQT QPRQCNWSSE KTTTTAAMTA LNNPSSSDPR  240
RDQGSSSKDQ IIPQTDDFSS MNLAAPPISS NYTAIDHIQQ LKQDHFSFLP FRKSFDEAGN  300
IGEASIAREG GGACEEREMG QHHVSHEHDI PQHHVTHEHH HHASTHQMAA TAFHISRPSH  360
SISTIISPPP LHHNSINILD QDHTFHVPRI MLPNENFQQQ QQQQSQQHHK LGGRSASGLE  420
ELIMGCTSSN DIKEESAMGM QQEAEWLKYS SFWPDPDNPD HHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-144	NAC family protein