PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN17925.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | NAC | ||||||||
Protein Properties | Length: 416aa MW: 46355.8 Da PI: 4.6142 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 83.4 | 4.6e-26 | 56 | 197 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk....leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tksgyWk 84 p+G++F+P+d el+ e L++k+ + + ++e+i++++ i++ +P++Lp +k++ +++yfF + +++ya+gkrk+r +s W+ PIN17925.1 56 PAGVKFDPSDVELL-ENLAAKCGVGNlkphMLIDEFIPTLEgdngICYRHPENLP-GAKKDGSSVYFFYRPRNAYASGKRKRRRihdqenttNTSVCWQ 152 89************.669999877775565333334554423345**********.556778899******************75788886433788** PP NAM 85 atgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +tgk+++v++ +g ++g++k++v+ + + +k+e+++Wvm +y+l PIN17925.1 153 KTGKTRPVMK-NGVQKGCQKIMVLKstSRKGSKPENCNWVMYQYHL 197 **********.999**********955346667779********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 416 aa Download sequence |
MASAWLMDSR GLAKKVKNAC EPAADQIKDC GAVRECPNCH YQIDNSDVSP DWPGFPAGVK 60 FDPSDVELLE NLAAKCGVGN LKPHMLIDEF IPTLEGDNGI CYRHPENLPG AKKDGSSVYF 120 FYRPRNAYAS GKRKRRRIHD QENTTNTSVC WQKTGKTRPV MKNGVQKGCQ KIMVLKSTSR 180 KGSKPENCNW VMYQYHLGTD KDEKEGEYVV SKIFFKPPRD TDKIESSLEV EESDIGTVQV 240 IPRTPKTNTP EPPRLEKTPT SVYGSDDHLL QSLEPPRLEE TPTSVCCSDD YLLQSLIQET 300 ENLKEPAHPS DGSVLEDKME YATCLAAGSE DVLGGADSLF CDEIIDSFAT FNELRPDNVS 360 STQVGSNMSD VHQRDISASC DIGDLNNLEL NNPPDFLLTD LQFASQDSVF DWLDRL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 132 | 137 | KRKRRR |
2 | 133 | 137 | RKRRR |
3 | 134 | 138 | KRRRI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14490.1 | 1e-87 | NAC family protein |