PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN17738.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 377aa MW: 41243.6 Da PI: 8.1321

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN17738.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	65.2	1.2e-20	13	58	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEde+l ++v+++G+++W++I++ ++ gR++k+c++rw + PIN17738.1 13 KGPWSPEEDERLQQLVQKHGPRNWSLISKSIP-GRSGKSCRLRWCNQ 58 79****************************.*********985 PP
2	Myb_DNA-binding	56.2	8.1e-18	67	109	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEde +++a++++G++ W+tIar + gRt++ +k++w++ PIN17738.1 67 AFTPEEDETIIRAHAKFGNK-WATIARLLS-GRTDNAIKNHWNST 109 79****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MAANGKMDMD RIKGPWSPEE DERLQQLVQK HGPRNWSLIS KSIPGRSGKS CRLRWCNQLC 60 PQVEHRAFTP EEDETIIRAH AKFGNKWATI ARLLSGRTDN AIKNHWNSTL KRKCSSLSSD 120 EGNFNSNDNN EVGNQQHRPL KRSVSAGSGV PVSGLYLSPG SPSGSDVSDS SLPVMSASHV 180 YKPVARAGGV MPSQLETASS SQDPATSLSL SLPGVESTES TNSKTESAQA KTNPTQLLPV 240 LPTPPPPPPP LPPAAMPVQP QTSLINNMAA FGSPATAASL SAPTEMQQQD NIFVPMTAEL 300 MAVMQDMIRA EVRNYMMGLQ QQQQQLYLLQ QQQYMNQQHY NQQQYQQMGM CMQQKQVCMR 360 DSGMPPSTAL ESAGLIN

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MAANGKMDMD RIKGPWSPEE DERLQQLVQK HGPRNWSLIS KSIPGRSGKS CRLRWCNQLC  60
PQVEHRAFTP EEDETIIRAH AKFGNKWATI ARLLSGRTDN AIKNHWNSTL KRKCSSLSSD  120
EGNFNSNDNN EVGNQQHRPL KRSVSAGSGV PVSGLYLSPG SPSGSDVSDS SLPVMSASHV  180
YKPVARAGGV MPSQLETASS SQDPATSLSL SLPGVESTES TNSKTESAQA KTNPTQLLPV  240
LPTPPPPPPP LPPAAMPVQP QTSLINNMAA FGSPATAASL SAPTEMQQQD NIFVPMTAEL  300
MAVMQDMIRA EVRNYMMGLQ QQQQQLYLLQ QQQYMNQQHY NQQQYQQMGM CMQQKQVCMR  360
DSGMPPSTAL ESAGLIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G23290.1	3e-78	MYB family protein