PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN17593.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NAC

Protein Properties

Length: 315aa MW: 36317.5 Da PI: 8.7281

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN17593.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	178	2.5e-55	17	143	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdeel+++yL kkv + ++++ +i evd++kvePw+Lp ++k +ekewyfF+ rdkky+tg r+nrat++gyWkatgkdke+++ +++l PIN17593.1 17 LPPGFRFHPTDEELITHYLSKKVLDPSFSA-VAIGEVDMNKVEPWELPWRAKVGEKEWYFFCVRDKKYPTGLRTNRATAKGYWKATGKDKEIFR-GKTL 113 79***********************999.67***********988999*************************************.999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrle 129 vg+kktLvfykgrapkgekt+Wv+heyrle PIN17593.1 114 VGMKKTLVFYKGRAPKGEKTNWVIHEYRLE 143 ****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence
MEKNSFGVVK RDDQMELPPG FRFHPTDEEL ITHYLSKKVL DPSFSAVAIG EVDMNKVEPW 60 ELPWRAKVGE KEWYFFCVRD KKYPTGLRTN RATAKGYWKA TGKDKEIFRG KTLVGMKKTL 120 VFYKGRAPKG EKTNWVIHEY RLEGKFSLQN LPKQVKPNDW VMIRVFHKTS GGKKFHISEL 180 KRMTLEENIS SPSTMPPLMD PSPTNDKIKH VEVEPKPKPE PESSQVHCSS KPITAPEKNH 240 ENLITFFDDP IFPSFPIDPF FKNLNENYEQ NMNQGFRKEK KMVSLSQEVG TIAFEEQEAA 300 ASSVGVEDLD CIWSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G07680.1	1e-110	NAC family protein