PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN17395.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NAC

Protein Properties

Length: 368aa MW: 41524.3 Da PI: 8.7446

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN17395.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	161.5	3.3e-50	33	158	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100 +pGfrFhPt+eelv +yL++kvegk++++ e i+ +d+y+++Pw+Lp+ ++ +ekewyf+++rd+ky++g+r+nr+t+sgyWkatg d+ + s++ + + PIN17395.1 33 MPGFRFHPTEEELVEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPALAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRSENLRSI 130 79*************************.89***********8778899***************************************** PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 glkktLvfy+g+apkg +t+W+m+eyrl PIN17395.1 131 GLKKTLVFYSGKAPKGIRTSWIMNEYRL 158 ************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MAIAASMNNN QEVDSSNKKQ LDGDDEHEYD MVMPGFRFHP TEEELVEFYL RRKVEGKRFN 60 VELITFLDLY RYDPWELPAL AAIGEKEWYF YVPRDRKYRN GDRPNRVTTS GYWKATGADR 120 MIRSENLRSI GLKKTLVFYS GKAPKGIRTS WIMNEYRLPL HETERLQKAE ISLCRVYKRA 180 GVEDHPSLPR SLPTRASSSR SASRNQTTYG SNASHRSDGS GKLTETSPTS SNSYSLNPIL 240 PIASPTIIPS PTSGQEDSHT MIMSQSKQPS NSSLSPTIFA SSSSSSSHAI DDLHKLVNIN 300 YSQQVSILSN QDINPHYPSN NIVLSQFSSP LQPTTTVGLG SFHAAFSDRL WDWSGISDAN 360 KDFYNLFK

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MAIAASMNNN QEVDSSNKKQ LDGDDEHEYD MVMPGFRFHP TEEELVEFYL RRKVEGKRFN  60
VELITFLDLY RYDPWELPAL AAIGEKEWYF YVPRDRKYRN GDRPNRVTTS GYWKATGADR  120
MIRSENLRSI GLKKTLVFYS GKAPKGIRTS WIMNEYRLPL HETERLQKAE ISLCRVYKRA  180
GVEDHPSLPR SLPTRASSSR SASRNQTTYG SNASHRSDGS GKLTETSPTS SNSYSLNPIL  240
PIASPTIIPS PTSGQEDSHT MIMSQSKQPS NSSLSPTIFA SSSSSSSHAI DDLHKLVNIN  300
YSQQVSILSN QDINPHYPSN NIVLSQFSSP LQPTTTVGLG SFHAAFSDRL WDWSGISDAN  360
KDFYNLFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02450.1	1e-107	NAC family protein