PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN17319.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | NAC | ||||||||
Protein Properties | Length: 207aa MW: 23686.2 Da PI: 4.75 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 68.2 | 2.3e-21 | 12 | 157 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleev..ikevdiykvePwdLpk........kvkaeekewyfFskrdkkya......tgkrknratk..sg 81 lp G+rF+Ptd el ++yL+kkv+++++ +++ i+ + y++ P+ + ++++e +e+ k + + + ++++k r++ g PIN17319.1 12 LPIGYRFDPTDLELATFYLQKKVSSRPVVGDDIkeIDAHEFYSHSPEAIGIyrsqdhdlTMEQEGEEVPMIGKDRIEMNeefhkqEENQKIRIVGdgIG 110 699************************666432236666799999999963356677664444444443222222211112211133455554444479 PP NAM 82 yWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 yW+++gk++ ++++ g++ k +++++g+ ++g++t+W ++ey+l PIN17319.1 111 YWRSSGKKEVIYDAMGRAYAFKIHFIYFSGSPNRGKQTHWRLEEYHL 157 9********************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 207 aa Download sequence |
MSFGDGICPI ELPIGYRFDP TDLELATFYL QKKVSSRPVV GDDIKEIDAH EFYSHSPEAI 60 GIYRSQDHDL TMEQEGEEVP MIGKDRIEMN EEFHKQEENQ KIRIVGDGIG YWRSSGKKEV 120 IYDAMGRAYA FKIHFIYFSG SPNRGKQTHW RLEEYHLISG EGSCDGGRDD HDDGGDPDNG 180 GDERRNSKID DWVLGRITRG RNYASFI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G77450.1 | 1e-14 | NAC family protein |