PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PIN17104.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 224aa MW: 25442.9 Da PI: 5.6525 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 107.5 | 1.6e-33 | 6 | 127 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyat.gkrknratksgyWkatgkdkevlskk 96 +GfrFhPt+eel+ +g++ ++++ + + i++++Pw+ p+ +++++ ++w+fF++r++++a+ g r+nr tk+gyWkatg+ ev+s++ PIN17104.1 6 VGFRFHPTEEELL--------KGQH-QTSTGLYLLSIFNYNPWERPQlageRCQGDAEQWFFFIPRQEREARgGIRPNRLTKEGYWKATGSPGEVYSSQ 95 7***********9........3333.2334588899*******998556667777889********999997478************************ PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +g kkt+vfy+grap+g+kt+W m+ey++ PIN17104.1 96 NQRIGSKKTMVFYEGRAPNGRKTSWKMNEYKV 127 ******************************86 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 224 aa Download sequence |
MNDLGVGFRF HPTEEELLKG QHQTSTGLYL LSIFNYNPWE RPQLAGERCQ GDAEQWFFFI 60 PRQEREARGG IRPNRLTKEG YWKATGSPGE VYSSQNQRIG SKKTMVFYEG RAPNGRKTSW 120 KMNEYKVFDD YDHDHGGADL KVREEPSLCR IYRRSKCSSA FDRQPPTGDE MAVHQPQNHA 180 DEPITTNNQQ INPPEIIDGG VDSSSSGDQN TNPSQSVENE TVGI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G44350.2 | 3e-61 | NAC family protein |