PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN17012.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family Whirly
Protein Properties Length: 273aa    MW: 30255.2 Da    PI: 9.7735
Description Whirly family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN17012.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Whirly208.57.4e-65962341139
      Whirly   1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalkvePl 99 
                 s+yk+kaal+v+++ p+f+aldsg++k++++G++ll++a+a ++r+ydW+ kq+f+ls+ e++++++l++++sceffhdp+++ s+eGkvrk+lkvePl
  PIN17012.1  96 SIYKGKAALSVDPRPPEFSALDSGAFKVSKEGFVLLQFAPASGVRQYDWGSKQVFSLSVFEMGNIMSLGTRDSCEFFHDPFKGRSDEGKVRKVLKVEPL 194
                 7************************************************************************************************** PP

      Whirly 100 pdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsllv 139
                 pdGsG+f+nlsv+n+l++ +e++++P++kaefavl s ++
  PIN17012.1 195 PDGSGHFFNLSVQNKLINLDENIYIPITKAEFAVLVSTFN 234
                 ***********************************99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MINLSFSAIP KGGGLAIENP NKVSSFNSSV PSSILFTGRR SAVSIGPHGK YPRNISFRVQ  60
ARYLTPQDEQ QRFSSYDAPP SSQPGQLPPR VYVGYSIYKG KAALSVDPRP PEFSALDSGA  120
FKVSKEGFVL LQFAPASGVR QYDWGSKQVF SLSVFEMGNI MSLGTRDSCE FFHDPFKGRS  180
DEGKVRKVLK VEPLPDGSGH FFNLSVQNKL INLDENIYIP ITKAEFAVLV STFNFVVPYL  240
LGWHTFANSI FPQDANRVNN ANPRSGADFE WNR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14410.11e-116Whirly family protein