PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN17012.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | Whirly | ||||||||
Protein Properties | Length: 273aa MW: 30255.2 Da PI: 9.7735 | ||||||||
Description | Whirly family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Whirly | 208.5 | 7.4e-65 | 96 | 234 | 1 | 139 |
Whirly 1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalkvePl 99 s+yk+kaal+v+++ p+f+aldsg++k++++G++ll++a+a ++r+ydW+ kq+f+ls+ e++++++l++++sceffhdp+++ s+eGkvrk+lkvePl PIN17012.1 96 SIYKGKAALSVDPRPPEFSALDSGAFKVSKEGFVLLQFAPASGVRQYDWGSKQVFSLSVFEMGNIMSLGTRDSCEFFHDPFKGRSDEGKVRKVLKVEPL 194 7************************************************************************************************** PP Whirly 100 pdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsllv 139 pdGsG+f+nlsv+n+l++ +e++++P++kaefavl s ++ PIN17012.1 195 PDGSGHFFNLSVQNKLINLDENIYIPITKAEFAVLVSTFN 234 ***********************************99875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 273 aa Download sequence |
MINLSFSAIP KGGGLAIENP NKVSSFNSSV PSSILFTGRR SAVSIGPHGK YPRNISFRVQ 60 ARYLTPQDEQ QRFSSYDAPP SSQPGQLPPR VYVGYSIYKG KAALSVDPRP PEFSALDSGA 120 FKVSKEGFVL LQFAPASGVR QYDWGSKQVF SLSVFEMGNI MSLGTRDSCE FFHDPFKGRS 180 DEGKVRKVLK VEPLPDGSGH FFNLSVQNKL INLDENIYIP ITKAEFAVLV STFNFVVPYL 240 LGWHTFANSI FPQDANRVNN ANPRSGADFE WNR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14410.1 | 1e-116 | Whirly family protein |