PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN16812.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

G2-like

Protein Properties

Length: 366aa MW: 41380.4 Da PI: 7.7598

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN16812.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.4	1.6e-33	46	100	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wtp+LHerF+eav+qLGG+ekAtPk++l+lm+++gLtl+h+kSHLQkYRl PIN16812.1 46 KPRLKWTPDLHERFIEAVNQLGGAEKATPKSVLKLMGIQGLTLYHLKSHLQKYRL 100 79****************************************************8 PP
2	Myb_DNA-binding	62.8	6.7e-20	48	99	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT++++e++++av+qlGg t+k++ + mg +g+tl+++ks++qky+ PIN16812.1 48 RLKWTPDLHERFIEAVNQLGGAekaTPKSVLKLMGiQGLTLYHLKSHLQKYR 99 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MYHHQHHQGK NIHPSSRMSI PPERHLFLQG ANGAGDSGLV LSTDAKPRLK WTPDLHERFI 60 EAVNQLGGAE KATPKSVLKL MGIQGLTLYH LKSHLQKYRL SKNLHGQANS GSHKHSVADR 120 VPEVNGSHMS NPNIATQTTK NMHLGEAIQM QIEVQRRLHE QLEVQRHLQL RIEAQGMKEL 180 SDLCLRQTQT TQPTDCSMDS CLTSCEGSMR DQELYHNSIG LRPINFGAPT EPRVNDNETS 240 LQKMELRWHE DPKEGRKNLL MANDNVENTF IKKTNLNGLS MSIGLQGGNW NGKGNYPEER 300 SKGQEADAKL FKQTSDSDDL MKPEKQRRSP ELNQPFFSTK LDLNTDDYND VASSCKQFDL 360 NGFSWS

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MYHHQHHQGK NIHPSSRMSI PPERHLFLQG ANGAGDSGLV LSTDAKPRLK WTPDLHERFI  60
EAVNQLGGAE KATPKSVLKL MGIQGLTLYH LKSHLQKYRL SKNLHGQANS GSHKHSVADR  120
VPEVNGSHMS NPNIATQTTK NMHLGEAIQM QIEVQRRLHE QLEVQRHLQL RIEAQGMKEL  180
SDLCLRQTQT TQPTDCSMDS CLTSCEGSMR DQELYHNSIG LRPINFGAPT EPRVNDNETS  240
LQKMELRWHE DPKEGRKNLL MANDNVENTF IKKTNLNGLS MSIGLQGGNW NGKGNYPEER  300
SKGQEADAKL FKQTSDSDDL MKPEKQRRSP ELNQPFFSTK LDLNTDDYND VASSCKQFDL  360
NGFSWS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18240.1	1e-102	G2-like family protein