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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | PIN16762.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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| Family | NAC | ||||||||
| Protein Properties | Length: 320aa MW: 36429.7 Da PI: 6.6762 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 179.7 | 7.4e-56 | 16 | 142 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99
lppGfrFhPtdeel+++yL +kv++ ++++ +++++vd++k+ePwdLp+k++ +ekewyfFs rd+ky+tg r+nrat++gyWk+tgkdke+l+ ++ l
PIN16762.1 16 LPPGFRFHPTDEELITYYLSNKVSDFEFTT-RAVADVDLNKCEPWDLPAKASMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKTTGKDKEILR-GNIL 112
79*************************999.88***************999999***************************************9.99** PP
NAM 100 vglkktLvfykgrapkgektdWvmheyrle 129
vg+kktLvfy+grapkgekt+Wvmheyrle
PIN16762.1 113 VGMKKTLVFYRGRAPKGEKTNWVMHEYRLE 142
****************************85 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 320 aa Download sequence |
MEENNCNNNN NNNNNLPPGF RFHPTDEELI TYYLSNKVSD FEFTTRAVAD VDLNKCEPWD 60 LPAKASMGEK EWYFFSLRDR KYPTGLRTNR ATEAGYWKTT GKDKEILRGN ILVGMKKTLV 120 FYRGRAPKGE KTNWVMHEYR LENKLAFKAT KDEWVVCRVF QKSSTVKKPQ QTPSSPVSHE 180 SLCDTNAMIN ELGDIELPNF NNNMAINSSS TNNIALQNYN TNDHSNMMMN WSAATDSLPS 240 LTWPFLSTNL SMNSLLLTAL QLRGRGQTSA TSEHYNSFMP QGNVSQFGND FNMASSTSRV 300 LDSVPQPPLE QPFNLDSNIW |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT3G18400.1 | 1e-101 | NAC family protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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