PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN16730.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

G2-like

Protein Properties

Length: 396aa MW: 44080.2 Da PI: 6.1987

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN16730.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105	4.5e-33	231	285	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWtpeLHe Fv+av++LGGsekAtPk +l++m+v+gLt++hvkSHLQkYR+ PIN16730.1 231 KARIRWTPELHEVFVDAVNKLGGSEKATPKGVLKFMNVEGLTIYHVKSHLQKYRS 285 68****************************************************7 PP
2	Myb_DNA-binding	54.3	3.2e-17	235	284	3	48
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rWT+e++e +vdav++lGg t+k + + m+ +g+t +++ks++qky+ PIN16730.1 235 RWTPELHEVFVDAVNKLGGSekaTPKGVLKFMNvEGLTIYHVKSHLQKYR 284 9***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence
MAPALKTKSS EAQSNEMEAS RAMSRPFHIF PSSLEEKFPK LQDSPHVTIG QEPTYNMHSS 60 NHKKAGHPLP SASGCSTHYS MSPKDGVSFA STQVSHSVIQ TRQLDGYAVE HNDVSWSAKT 120 IENFLDSPLN IPFQNGQIET SDVVRASDDC DKKTDWQDWS NQLITVADHA LESNWSDLLV 180 DVNVPDPDTK ILDLPSDFSA FPPQIHQQQQ HPLQSGNGSP LTGSPNAPLP KARIRWTPEL 240 HEVFVDAVNK LGGSEKATPK GVLKFMNVEG LTIYHVKSHL QKYRSARFKP ESSEGTSEKK 300 SNTATESTSL DLKSMMGITE ALKLQMEVQK QLHEQLEIQR NLQLRIEEQG KHLQMIFEQQ 360 RKMGEEKLKA SSSNSDGPAQ IPAVEKQPSL NDDKPE

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence

MAPALKTKSS EAQSNEMEAS RAMSRPFHIF PSSLEEKFPK LQDSPHVTIG QEPTYNMHSS  60
NHKKAGHPLP SASGCSTHYS MSPKDGVSFA STQVSHSVIQ TRQLDGYAVE HNDVSWSAKT  120
IENFLDSPLN IPFQNGQIET SDVVRASDDC DKKTDWQDWS NQLITVADHA LESNWSDLLV  180
DVNVPDPDTK ILDLPSDFSA FPPQIHQQQQ HPLQSGNGSP LTGSPNAPLP KARIRWTPEL  240
HEVFVDAVNK LGGSEKATPK GVLKFMNVEG LTIYHVKSHL QKYRSARFKP ESSEGTSEKK  300
SNTATESTSL DLKSMMGITE ALKLQMEVQK QLHEQLEIQR NLQLRIEEQG KHLQMIFEQQ  360
RKMGEEKLKA SSSNSDGPAQ IPAVEKQPSL NDDKPE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	1e-77	G2-like family protein