PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN16648.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family G2-like
Protein Properties Length: 330aa    MW: 36791.7 Da    PI: 4.5424
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN16648.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like100.31.3e-314498155
     G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                ++rlrWt eLH++Fv+av++LGG++kAtPk+il+lm+v+gLtl+h+kSHLQk+Rl
  PIN16648.1 44 RQRLRWTAELHDQFVKAVNELGGADKATPKAILNLMGVEGLTLYHLKSHLQKFRL 98
                58****************************************************8 PP
2Myb_DNA-binding59.47.8e-194697148
                     TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                     r+rWT+e+++++v+av++lGg    t+k+I + mg +g+tl+++ks++qk++
       PIN16648.1 46 RLRWTAELHDQFVKAVNELGGAdkaTPKAILNLMGvEGLTLYHLKSHLQKFR 97
                     89******************99****************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MAENERHRRE LPPATAAAVE ADDECPGEKI EDVDSDIYQI SYPRQRLRWT AELHDQFVKA  60
VNELGGADKA TPKAILNLMG VEGLTLYHLK SHLQKFRLGK TSRRLWKREF VPADYRLKQD  120
ERSPPVSLQN QGSLVTNTFD SSPFVQGLTC YSYRSPHECK IEILGAETYR NSHQLVEPQA  180
ALRNLELQQT TSAININQQP DNSATNASES EEVLASSKPA LLPLFPPIPS SGIDSPPEWT  240
ELFDGEEKKP VFPQPTDHNA PMDDYLNSFA LSKSSESGRA SMRFGSFFDD VESFSKVEDN  300
DLTADDRIAG AMDPADHDSS SSSSIPIDYT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13640.18e-27G2-like family protein