PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN16450.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | bHLH | ||||||||
Protein Properties | Length: 229aa MW: 25454.2 Da PI: 10.3472 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 26.3 | 1.3e-08 | 131 | 171 | 9 | 54 |
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r RR+ri +++ L++l+P +K++ a++L +A++Y+k L PIN16450.1 131 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 171 699*****************87.....8****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MDVDFMNSSA EAHMEMMLLQ MDNPNHIPFT ESIYTGNNIT STMNNDVAIE NLMNPFSGEV 60 HQHPPAQPVL HHHTSGGGRR SGPARNNSMA AMREMIFRIA AMQPVHIDPE SVKPPKRKNV 120 KISTDPQSVA ARHRRERISE RIRILQRLVP GGTKMDTASM LDEAIHYVKF LKNQVQSLER 180 VAGNRPPPPP PIGFPVGMSS GSYFPASVKG SYLLITERSR LAKHASIFG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50330.1 | 4e-42 | bHLH family protein |