PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN16432.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 248aa    MW: 27489.3 Da    PI: 8.2469
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN16432.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.98.4e-09157197954
                 HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  PIN16432.1 157 ARHRRERISDRIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 197
                 699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MDIDFMKSSA EDQMELMLMQ MDKLPDFSGT YEIPMMEFSN HQGSNTNIPC NNNNNLENPT  60
YMNLPQPTTI SFSGGVHQDP SPSILQPPVN SSGGRWKMDE FSGEGGSASH KRNSMAAMRE  120
MIFRIAAMQP IHIDPEAVKP PKRRNVKIST DPQSVAARHR RERISDRIRI LQRLVPGGTK  180
MDTASMLDEA IHYVKFLKNQ VQSLERVAAN RPAGVGFPVP MSSGSYFPVA GKGYCQSAPP  240
NVQHLADA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67060.11e-45bHLH family protein