PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN16422.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 234aa MW: 26121.3 Da PI: 6.5325 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 60.1 | 3.5e-19 | 139 | 193 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++k+q +Lee F+++++++ +++ LAk+lgL rqV vWFqNrRa+ k PIN16422.1 139 RKKLRLSKDQSAILEESFKEHNTLNPKQKMALAKRLGLRPRQVEVWFQNRRARTK 193 788899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 130.5 | 6.5e-42 | 139 | 228 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rlsk+q+++LEesF+e+++L+p++K++la++Lgl+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+kev+eLr +l PIN16422.1 139 RKKLRLSKDQSAILEESFKEHNTLNPKQKMALAKRLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELR-AL 228 69*************************************************************************************9.55 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MMVEREDLGL SLSLSFPAEK SAASNPSPLP LNLMPSSSPS TFSIMQKTCW NQPFSSSDLS 60 SETCRVETRS FLKGIDVNCL PAAAADVEEE AGVSSPNSTI SSVSGKRSER EASGGSEEHD 120 GERACSRGVS DEEDAENSRK KLRLSKDQSA ILEESFKEHN TLNPKQKMAL AKRLGLRPRQ 180 VEVWFQNRRA RTKLKQTEVD CEFLKRCCEN LTEENRRLQK EVQELRALKL SPQL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 138 | 144 | SRKKLRL |
2 | 188 | 196 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16780.1 | 2e-79 | HD-ZIP family protein |