PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN16288.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | ZF-HD | ||||||||
Protein Properties | Length: 188aa MW: 21557.4 Da PI: 7.8806 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 70 | 3.8e-22 | 12 | 64 | 3 | 56 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRre 56 +++Y +Cl+NhAa++ ++vDGCg f +s g +gt++a+ CaAC+CHRnFH+ PIN16288.1 12 AITYMQCLRNHAAHTIYYVVDGCGLFEAS-GPNGTPEAMVCAACQCHRNFHKTV 64 579*************************9.999******************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 188 aa Download sequence |
MAASNNENIE YAITYMQCLR NHAAHTIYYV VDGCGLFEAS GPNGTPEAMV CAACQCHRNF 60 HKTVVVELPS HFNTQGTNTG TDPAQLPQPQ IAVAGVQEQI HDANNHARGP VIEMNMPPQM 120 AQNWIRQRIT PEQSERLRIH AERNNWKMFR EYSREEVGRI CLEVGIIEVT FKRWINYHRR 180 RRMANNAI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G18350.1 | 2e-20 | ZF-HD family protein |