PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN16244.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 264aa    MW: 29018 Da    PI: 9.3574
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN16244.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.21.1e-193080256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                ++ GVr+++ +grWvAeI+d s   +r r +lg+++++eeAa+a+++a+++l+ge
  PIN16244.1 30 RFVGVRQRP-SGRWVAEIKDSS---QRVRLWLGTYDSPEEAARAYDEAARALRGE 80
                589******.7*********43...36**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MAGCDKTKTT ISTSNTNKQQ QPAKSAAARR FVGVRQRPSG RWVAEIKDSS QRVRLWLGTY  60
DSPEEAARAY DEAARALRGE NARTNFSAAN SNGTESDAKH GLSFSSLKAK LSKNLQSIMA  120
RNSENKASKS RVSDHFTFAS IFHFKGYHQY HQNHVDMKKI EKVVQPSVIV PHACNEPSSW  180
ENSSLSDYSS EWASLKQLGL ESDGSEMSDV HSFNEQGIGD QTMGWISSPD AVGGSEGSRS  240
KRFKVSSSVV VPPTFSESPS FGDW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.14e-16ERF family protein