PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN16239.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

G2-like

Protein Properties

Length: 520aa MW: 58571 Da PI: 6.5448

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN16239.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	76.2	4.2e-24	191	243	1	54
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 kpr++Wt e+H++F+ea++ + G +kA+Pk+i+e+m+++gLt+e+v+SHLQk+R PIN16239.1 191 KPRVVWTMEMHQKFLEAIDII-GYDKAVPKKIVEVMGIPGLTRENVASHLQKFR 243 79*****************.****************************** PP
2	Myb_DNA-binding	24.6	5.7e-08	193	243	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r WT e ++++++a+ G + +k+I + mg g+t++++ s++qk++ PIN16239.1 193 RVVWTMEMHQKFLEAIDIIGYDkaVPKKIVEVMGiPGLTRENVASHLQKFR 243 678**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 520 aa Download sequence
MGTKGTCILL VNNDLTCNRI VHEMLQHCNH KVLHIGGVMD VLNAIWEKRD MLDLVLTNAH 60 KLESNGTEVI QHIQKKLNLP IILMCPDKNR ITSKGQPFSF AAYVLNGLSR NDVNNLWQHA 120 LEKESHKLMA AYQQENAQEP SMANNVVKTN KTYSSTSDAT RFNHKRKRNE LAQKIEKSDQ 180 DDKEDPPVAK KPRVVWTMEM HQKFLEAIDI IGYDKAVPKK IVEVMGIPGL TRENVASHLQ 240 KFRGNIKRIQ ETAYGSSTTS LSNGLCVSPS PSVSRFNVLQ RNITPLWESS YISHSKESMS 300 TYLADQLQQS HVSALQAFPN HRIYGDKMRS MLLRVCKNSS FGDCNKSNTS KFVGYRLTSD 360 GNSIEFGEFE DEISRDSLIS SLGISERHSM SYVKHVGDSS QELALHPLQS PSIQPVRAET 420 LENTIRTQNL SENDILVHNS LTFSTTCQDY LMPSLEIPGD ELLFQNSVAF SEGTSEQHYS 480 SPSLPEMLQH LDEFLDIGGI DVEGTSSGFD EQKHDHKHDD

Sequence ? help Back to Top

Protein Sequence Length: 520 aa Download sequence

MGTKGTCILL VNNDLTCNRI VHEMLQHCNH KVLHIGGVMD VLNAIWEKRD MLDLVLTNAH  60
KLESNGTEVI QHIQKKLNLP IILMCPDKNR ITSKGQPFSF AAYVLNGLSR NDVNNLWQHA  120
LEKESHKLMA AYQQENAQEP SMANNVVKTN KTYSSTSDAT RFNHKRKRNE LAQKIEKSDQ  180
DDKEDPPVAK KPRVVWTMEM HQKFLEAIDI IGYDKAVPKK IVEVMGIPGL TRENVASHLQ  240
KFRGNIKRIQ ETAYGSSTTS LSNGLCVSPS PSVSRFNVLQ RNITPLWESS YISHSKESMS  300
TYLADQLQQS HVSALQAFPN HRIYGDKMRS MLLRVCKNSS FGDCNKSNTS KFVGYRLTSD  360
GNSIEFGEFE DEISRDSLIS SLGISERHSM SYVKHVGDSS QELALHPLQS PSIQPVRAET  420
LENTIRTQNL SENDILVHNS LTFSTTCQDY LMPSLEIPGD ELLFQNSVAF SEGTSEQHYS  480
SPSLPEMLQH LDEFLDIGGI DVEGTSSGFD EQKHDHKHDD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	3e-42	ARR-B family protein