PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN15819.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | Trihelix | ||||||||
Protein Properties | Length: 248aa MW: 28139.3 Da PI: 5.1574 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 77.5 | 2e-24 | 40 | 134 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rWt+qe+ +Lie+++ eer rrg+ + +p+W++vs+++r+ g++r+p+qC+++w+nl ++kkik +e++ ++e +s + + ++l+ PIN15819.1 40 RWTRQETVVLIEGKKIAEERGRRGRrpstvfgsdQPEPKWDSVSSFCRRNGVNRGPVQCRKRWSNLVSDFKKIKLWESQDRPEGESFWMMRSDLR 134 8*********************986667777777**********************************************999999999888875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MASGTNGSPE NAKSPVDVTD GQQPSPERTE DRNKTPRHPR WTRQETVVLI EGKKIAEERG 60 RRGRRPSTVF GSDQPEPKWD SVSSFCRRNG VNRGPVQCRK RWSNLVSDFK KIKLWESQDR 120 PEGESFWMMR SDLRRERRLP GFFDREVYDV LDGKAFAASE NQLALVVINA DGNNGERIDD 180 AEADDEDEMT EDDEPLKAFS EFEQVAPEEI GKEKVMTDGK AKSIPSPVPI SGTLKHSTVK 240 ILQSYIFI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33550.1 | 5e-61 | Trihelix family protein |