PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN15729.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 194aa MW: 21330.1 Da PI: 7.2142 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 50.7 | 3e-16 | 14 | 66 | 5 | 57 |
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +++++q++ Le+ F +++ e++ +LA++lg++ rq+ +W+qN+R ++k+ PIN15729.1 14 KRLSQDQVRLLETSFDAGKKLEPERKFQLARELGVPPRQIAIWYQNKRSRWKN 66 5689***********************************************95 PP | |||||||
2 | HD-ZIP_I/II | 106.1 | 2.7e-34 | 12 | 103 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +k+rls++qv+lLE+sF++ +kLeperK +lareLg+ prq+a+W+qn+R R+k++ lE d+ aL+ +++a +e+e+Lekeve+Lr elk+ PIN15729.1 12 QKKRLSQDQVRLLETSFDAGKKLEPERKFQLARELGVPPRQIAIWYQNKRSRWKNQSLELDHGALQVRLEAALSEKEQLEKEVESLRGELKR 103 69*************************************************************************************99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence |
MNLSPNPKPI IQKKRLSQDQ VRLLETSFDA GKKLEPERKF QLARELGVPP RQIAIWYQNK 60 RSRWKNQSLE LDHGALQVRL EAALSEKEQL EKEVESLRGE LKRAQDMLLG FRQAQAQAHQ 120 AACAAAPPVS SLSSCCDEGA GSSSLNDEVG CSANWANGGG LQFEELYACF MLGAARGSNC 180 GSIPGGANER DFWV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G53980.1 | 5e-37 | HD-ZIP family protein |