PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN15700.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family NAC
Protein Properties Length: 286aa    MW: 32703.8 Da    PI: 7.1773
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN15700.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM161.43.5e-50101381129
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 
                 lppGfrF P+deelv++yL kk++++++    ++ e+d++ +ePw+Lp  +k +++ewyfFs rd+kyatg r+nrat+sgyWkatgkd++vl+  +++
  PIN15700.1  10 LPPGFRFYPSDEELVCHYLYKKIANEEVLR-GTLVEIDLHVCEPWQLPDVAKLNSNEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRAVLDPkTRT 107
                 79*************************666.78***************87778899**************************************85566 PP

         NAM  99 lvglkktLvfykgrapkgektdWvmheyrle 129
                  vg++ktLvfyk+rap+g kt W+mhe+rle
  PIN15700.1 108 IVGMRKTLVFYKNRAPNGIKTGWIMHEFRLE 138
                 7***************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MGLRDIGETL PPGFRFYPSD EELVCHYLYK KIANEEVLRG TLVEIDLHVC EPWQLPDVAK  60
LNSNEWYFFS FRDRKYATGF RTNRATTSGY WKATGKDRAV LDPKTRTIVG MRKTLVFYKN  120
RAPNGIKTGW IMHEFRLENP HVPPKEDWVL CRVFHKSRGE NNNKFISPHN FYESTAVATS  180
PNLAISPKNV NENANIIPRC YQNMTSFYHS PSHNHQHQDQ GQNPSTSLGL SGLDPAYLHM  240
NLEPHLSSSN KVVNEGTKCE DDYGFLFDFD GSNGVMHSGL EDMGLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28530.12e-94NAC family protein