PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN15618.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family NAC
Protein Properties Length: 305aa    MW: 34532.8 Da    PI: 8.8551
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN15618.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM110.22.3e-34602021128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tksgyW 83 
                 lp+G++F+Ptd+e++ e+L++kv +++      ++++   i+   +i++++P++Lp  vk + +  +fF++ +k+y+tg+rk+r+          + +W
  PIN15618.1  60 LPAGVKFDPTDQEIL-EHLEAKVLSDTrklhplIDEFIPtIEGEnGICYTHPEKLP-GVKMDGQVRHFFHRPSKAYTTGTRKRRKvhcdaaseGGETRW 156
                 799***********9.99****999996665443332333665557**********.566677889******************85666654333678* PP

         NAM  84 katgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                 ++tgk+++v++  g+ +g kk+Lv+y   gr++k+ekt+Wvmh+y+l
  PIN15618.1 157 HKTGKTRPVTT-AGKIKGYKKILVLYtnYGRQRKPEKTNWVMHQYHL 202
                 ***********.999***********66589**************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MTWYDNHDEE KALRIISPNK ENITFSSSRS EQFKSIICPS CGHTIKPQDQ STGIQDLPGL  60
PAGVKFDPTD QEILEHLEAK VLSDTRKLHP LIDEFIPTIE GENGICYTHP EKLPGVKMDG  120
QVRHFFHRPS KAYTTGTRKR RKVHCDAASE GGETRWHKTG KTRPVTTAGK IKGYKKILVL  180
YTNYGRQRKP EKTNWVMHQY HLGDNEEERD GELVVSKVFY QTQPRQCGSS TMKEAIIDNA  240
NKLSISSNKI NTFERPNYQY YDSGFISYDV GSQNVNMENP NIHNLGIVAD GSSFIRLPSS  300
GSKGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.11e-118NAC family protein