PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN15588.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | G2-like | ||||||||
Protein Properties | Length: 247aa MW: 27832.4 Da PI: 7.9403 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 99.4 | 2.5e-31 | 175 | 228 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +r+rWt++LHe+F++ v++LGG++kAtPk+il+lm+ +gLt+ hvkSHLQkYR+ PIN15588.1 175 KRIRWTQDLHEKFIDSVNRLGGAKKATPKAILKLMNCHGLTIFHVKSHLQKYRV 228 79***************************************************7 PP | |||||||
2 | Myb_DNA-binding | 47.5 | 4.1e-15 | 178 | 227 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rWT++++e+++d v++lGg t+k+I + m+ g+t ++ks++qky+ PIN15588.1 178 RWTQDLHEKFIDSVNRLGGAkkaTPKAILKLMNcHGLTIFHVKSHLQKYR 227 9*****************99*****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MNNIMQKFGS FSTSNFEMQS FKSESLLKSC NDPQLLEISE GDRTTQSDNL SGCGQLNYSA 60 SSCSQMLNSN GLAFLEIADD SFQSKDTLQS IVQSCCCGLM SHNKSISSSS DSIQECKHHK 120 FQENKSVSES LRSLSHDSLL CFEKVINVEN HKCSKSQQEK QHSVSIEKEA MKKQKRIRWT 180 QDLHEKFIDS VNRLGGAKKA TPKAILKLMN CHGLTIFHVK SHLQKYRVGH LIPETMEENS 240 EKLDSKT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06800.2 | 4e-30 | G2-like family protein |