PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN15488.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family NAC
Protein Properties Length: 301aa    MW: 34839.1 Da    PI: 6.8764
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN15488.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM167.64.1e-52101341128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                 lp+GfrFhPtdeelvv+yL+++++g+++++  +i+e+d+yk++Pw+Lp+k+  +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk+v +   ++
  PIN15488.1  10 LPAGFRFHPTDEELVVHYLCRRCAGQQISV-PIIAEIDLYKFDPWELPAKALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPVGK--PKT 105
                 799***************************.88***************8777889*************************************98..778 PP

         NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                  g+kk Lvfy g+apkg+kt+W+mheyrl
  PIN15488.1 106 LGIKKALVFYAGKAPKGVKTNWIMHEYRL 134
                 ***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MKGGDQQLNL PAGFRFHPTD EELVVHYLCR RCAGQQISVP IIAEIDLYKF DPWELPAKAL  60
YGEKEWYFFS PRDRKYPNGS RPNRAAGTGY WKATGADKPV GKPKTLGIKK ALVFYAGKAP  120
KGVKTNWIMH EYRLANVDRS AGKRNNLRLD DWVLCRIYNK KGTLEKHYNV DQTEVQFSDS  180
EEQKPNVNAF QRSAMVPPAP TSRTPQILAS QTMNDYMHFD TSDSIPKLHT DSSSSEHVLS  240
PEFFCDKEVQ SEPKWSEFEN YLDFQLNYTD AFQDDPFTSQ MQYNDQFSQF QDMFAYMQKP  300
F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.11e-131NAC family protein