PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN15342.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

E2F/DP

Protein Properties

Length: 473aa MW: 53287 Da PI: 8.0719

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN15342.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	78	9.1e-25	211	275	1	70
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwk 70 r+++sL+llt+kf+kl++++++g+++ln a+ L +v ++RRiYDi+ VLe+++liek+ kn+irwk PIN15342.1 211 RYDSSLGLLTKKFVKLIQEAKDGTLDLNRTADVL---EV--QKRRIYDITKVLEGIGLIEKTTKNHIRWK 275 6899****************************...99..**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence
MSTSGENLDL NLSLNLPLSR MHLKGQSHSP VLRLDHVRPN PYAFILPTSN STGYSKLTPD 60 KSVTDYCNVT EKFVADCHDG ASTELRPNPF GLFRPPATHT NSFKLTPDNF FTNYHNGMNT 120 EQSRTPFPKK MSMPQNNASN ALGSVEGEVS GNARLQTPKQ EEEVNNFSPG PASHNGARRS 180 TKAKSAKHTK NVVREAKLEP VDNFNLTGCC RYDSSLGLLT KKFVKLIQEA KDGTLDLNRT 240 ADVLEVQKRR IYDITKVLEG IGLIEKTTKN HIRWKRYGIF GPNKMDDEVS SLKAEVEHLR 300 AEDCRLDDRI RDKQESLRDL TSNQNCQKNL FLTKEDIMSL PCFKNQTVIA VQAPRASFVE 360 VPDPDEDIDF RQKQYRLIVR STTGPVGVYL LSKNDQKSKD VSFKRTKLLD PLTWPSIRRF 420 DDANLSSSPD TPTSSKASGV QKIVPLDVGI DDDYWLRSDH ELSVSDLWSI EEL

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence

MSTSGENLDL NLSLNLPLSR MHLKGQSHSP VLRLDHVRPN PYAFILPTSN STGYSKLTPD  60
KSVTDYCNVT EKFVADCHDG ASTELRPNPF GLFRPPATHT NSFKLTPDNF FTNYHNGMNT  120
EQSRTPFPKK MSMPQNNASN ALGSVEGEVS GNARLQTPKQ EEEVNNFSPG PASHNGARRS  180
TKAKSAKHTK NVVREAKLEP VDNFNLTGCC RYDSSLGLLT KKFVKLIQEA KDGTLDLNRT  240
ADVLEVQKRR IYDITKVLEG IGLIEKTTKN HIRWKRYGIF GPNKMDDEVS SLKAEVEHLR  300
AEDCRLDDRI RDKQESLRDL TSNQNCQKNL FLTKEDIMSL PCFKNQTVIA VQAPRASFVE  360
VPDPDEDIDF RQKQYRLIVR STTGPVGVYL LSKNDQKSKD VSFKRTKLLD PLTWPSIRRF  420
DDANLSSSPD TPTSSKASGV QKIVPLDVGI DDDYWLRSDH ELSVSDLWSI EEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G47870.2	6e-89	E2F/DP family protein