PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN14336.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | NAC | ||||||||
Protein Properties | Length: 427aa MW: 48337.1 Da PI: 7.7671 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 108.4 | 8.3e-34 | 44 | 187 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.....lelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.......tk 79 lp+G++F+Ptd el+ ++L++kv + + +i+ +i++++P++Lp v+++ + +fF++ +k+y+tg+rk+r+ PIN14336.1 44 LPAGVKFDPTDMELM-QHLEAKVMQAGresksH---PlidefipTIEGEdGICYTHPQNLP-GVREDGLSRHFFHRPSKAYTTGTRKRRKilmdehdLG 137 799************.99****99888455551...044454444776646**********.666777799******************8688777755 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ kt+Wvmh+y+l PIN14336.1 138 ETRWHKTGKTRPVMV-NGKQKGCKKILVLYtnFGKNRKPLKTNWVMHQYHL 187 889************.999***********5447999999*********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 427 aa Download sequence |
MNKTRSVSNC DIIDSKLEEH QLCGSKQCPS CGQKLQGKPD WVGLPAGVKF DPTDMELMQH 60 LEAKVMQAGR ESKSHPLIDE FIPTIEGEDG ICYTHPQNLP GVREDGLSRH FFHRPSKAYT 120 TGTRKRRKIL MDEHDLGETR WHKTGKTRPV MVNGKQKGCK KILVLYTNFG KNRKPLKTNW 180 VMHQYHLGKN EEEKEGELVV SKVFYQTQPR HSWLSDQRGT SGNKDNRDSK DVGRPRISGY 240 GAVDVQQLKH DRFGIISFEK SFESFDRAGN IGEASTAREA QGAAGTRGVR DMGYHHVTQE 300 HELPQHHVTN EQQYPHGQIA NAAAVDMSSI SSSIILSPTP TVSSIILDED HSFNVPRFVL 360 PNQNFQQQQQ HDKIGEIRSA SGLDELIMAC TSSTHHAKQE SSIKNPQEAE WFKYSTMFWP 420 DQDHHHG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G29230.1 | 1e-111 | NAC family protein |