PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN14254.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

C2H2

Protein Properties

Length: 417aa MW: 45420 Da PI: 10.2858

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN14254.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.8	0.00017	185	206	3	23
ETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 3 CpdCgksFsrksnLkrHirt.H 23 C++Cg++F r++ + H + H PIN14254.1 185 CHKCGERFVRWEAVEEHHLSkH 206 *****************98877 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MPAVWFALKR SLQCKSEQRD VYDPKTTEGN KNLNKIQTKK SGRGSRSGCS RSIANLKDVV 60 IHGSKRHTEK PPICSPRSIG SSELLNPITH EVVLNNSTFE LKISTGSGFR EGGGGGSDDV 120 SNFVGMLKPG TPGPRLQVKR GNKQGILGSP IGRTSSSLSR RSSGFGAIST RPRSSFGADS 180 RGALCHKCGE RFVRWEAVEE HHLSKHAVTE LAEGDSSRKI VEIICRASCT RPDNNCGGIE 240 RILKVHNMQK TLAEFEEYRE LVKIKASKLS KKHPRCLADG NELLRFHGAT VECPLGLKGS 300 SSLCTSDNCR VCRILRYGFS TKKELSGGIG VFTASTSARA FELIQVFGGN PSQRKALIVC 360 RVIAGRVHRP LENIQEMASQ SGFDSLAGKV GVHSNTEELY LLSPRALLPC FVVIYKP

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MPAVWFALKR SLQCKSEQRD VYDPKTTEGN KNLNKIQTKK SGRGSRSGCS RSIANLKDVV  60
IHGSKRHTEK PPICSPRSIG SSELLNPITH EVVLNNSTFE LKISTGSGFR EGGGGGSDDV  120
SNFVGMLKPG TPGPRLQVKR GNKQGILGSP IGRTSSSLSR RSSGFGAIST RPRSSFGADS  180
RGALCHKCGE RFVRWEAVEE HHLSKHAVTE LAEGDSSRKI VEIICRASCT RPDNNCGGIE  240
RILKVHNMQK TLAEFEEYRE LVKIKASKLS KKHPRCLADG NELLRFHGAT VECPLGLKGS  300
SSLCTSDNCR VCRILRYGFS TKKELSGGIG VFTASTSARA FELIQVFGGN PSQRKALIVC  360
RVIAGRVHRP LENIQEMASQ SGFDSLAGKV GVHSNTEELY LLSPRALLPC FVVIYKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G27240.1	1e-148	C2H2 family protein