PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN14057.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

ARF

Protein Properties

Length: 786aa MW: 87117 Da PI: 6.395

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN14057.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	77.2	1.8e-24	177	278	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+k+lt sd++++g +++p++ ae++ +++ + s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv++++L +gD v+F + +++ l+ PIN14057.1 177 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyKEQ-RPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSTFVSQKNLVSGDAVLFL--RGEGGDLR 272 99**************************86333.45679*********************************************..4489999 PP EEEE-S CS B3 94 vkvfrk 99 ++++r+ PIN14057.1 273 LGIRRA 278 ***997 PP
2	Auxin_resp	111.3	9.4e-37	304	384	2	82
Auxin_resp 2 ahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 +a+st+s+F+v+Y+P+as+++Fvv+++k++k ++ vG+Rfkm+f+ +ds+err+sG+v+gvsd+dp+rWpnSkWr+L PIN14057.1 304 ENALSTNSTFQVFYSPKASHADFVVPYQKYLKCAASQTPVGTRFKMRFDLDDSPERRFSGVVTGVSDADPYRWPNSKWRCL 384 6899****************************************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 786 aa Download sequence
MEIDLNHAVG EMEKSACSNG GECDKRGDDS CVYCSLSTST SSCSSNAASG SSSPCSISSP 60 LSIYMELWHA CAGPLTSLPK KGNVVVYFPQ GHLEQVHSAS FPPMEMPTFD LPPQILCKVV 120 DVNLLADKEN DEVYTELTLL PLPEPVGVKL EGMEKENAGI DEEGNRVAPV KSTSHMFCKT 180 LTASDTSTHG GFSVPRRAAE DCFPPLDYKE QRPSQELVAK DLHGVEWKFR HIYRGQPRRH 240 LLTTGWSTFV SQKNLVSGDA VLFLRGEGGD LRLGIRRASR PRNGLPDSII KNQKSYPNVL 300 SPVENALSTN STFQVFYSPK ASHADFVVPY QKYLKCAASQ TPVGTRFKMR FDLDDSPERR 360 FSGVVTGVSD ADPYRWPNSK WRCLMVRWDD DIMNNHQERV SPWDIDFSGN YAPPSIQSSP 420 RMKRLRSNLQ ASSPISGGPL LEYESSVRSS KVLQGQENIG LLSPNPIRNA MEKINYGEFV 480 RNQAPTTFTG FLESNWFPKV LQGQEICSLR SLAAKTDWNP GTWSKPELGC NIYNTYQMPT 540 PSFYPLASEG ARNMLFPHPP IYPARQGPLT LSNFSNFQTG NHVINQTSAP SGAATHVGRM 600 PNPANEPRAL EKKSDPTTTL THGSDNNSNE KAPICKLFGY SLTEDPATHN LQGQSKRSCT 660 KVHKQGSLVG RAIDLPRLHS YDELLTELER LFSMEGLLRD PKHGWRVLYT DKENDMMVVG 720 DDPWNEFVEV ATKIHIYTQE EVEKLTIGTN SDDTQSCLEE APPHITDVSK PSSAGPPDFT 780 LTAIGM

Sequence ? help Back to Top

Protein Sequence Length: 786 aa Download sequence

MEIDLNHAVG EMEKSACSNG GECDKRGDDS CVYCSLSTST SSCSSNAASG SSSPCSISSP  60
LSIYMELWHA CAGPLTSLPK KGNVVVYFPQ GHLEQVHSAS FPPMEMPTFD LPPQILCKVV  120
DVNLLADKEN DEVYTELTLL PLPEPVGVKL EGMEKENAGI DEEGNRVAPV KSTSHMFCKT  180
LTASDTSTHG GFSVPRRAAE DCFPPLDYKE QRPSQELVAK DLHGVEWKFR HIYRGQPRRH  240
LLTTGWSTFV SQKNLVSGDA VLFLRGEGGD LRLGIRRASR PRNGLPDSII KNQKSYPNVL  300
SPVENALSTN STFQVFYSPK ASHADFVVPY QKYLKCAASQ TPVGTRFKMR FDLDDSPERR  360
FSGVVTGVSD ADPYRWPNSK WRCLMVRWDD DIMNNHQERV SPWDIDFSGN YAPPSIQSSP  420
RMKRLRSNLQ ASSPISGGPL LEYESSVRSS KVLQGQENIG LLSPNPIRNA MEKINYGEFV  480
RNQAPTTFTG FLESNWFPKV LQGQEICSLR SLAAKTDWNP GTWSKPELGC NIYNTYQMPT  540
PSFYPLASEG ARNMLFPHPP IYPARQGPLT LSNFSNFQTG NHVINQTSAP SGAATHVGRM  600
PNPANEPRAL EKKSDPTTTL THGSDNNSNE KAPICKLFGY SLTEDPATHN LQGQSKRSCT  660
KVHKQGSLVG RAIDLPRLHS YDELLTELER LFSMEGLLRD PKHGWRVLYT DKENDMMVVG  720
DDPWNEFVEV ATKIHIYTQE EVEKLTIGTN SDDTQSCLEE APPHITDVSK PSSAGPPDFT  780
LTAIGM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60450.1	0.0	ARF family protein