PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN14055.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family NAC
Protein Properties Length: 312aa    MW: 35608.2 Da    PI: 9.5718
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN14055.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM153.87.6e-48121382128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgel 99 
                 ppG+rF+P+d+el+++yL++kv++ +l++ +vi+++++y+++PwdLp+k+  ++ ewy+F++rd+ky++g r+nr+t++gyWkatg+dk+++   +++ 
  PIN14055.1  12 PPGIRFRPSDQELITYYLQRKVKSLPLPE-NVITDIELYSYNPWDLPRKALFGDAEWYYFTPRDRKYPNGGRPNRTTEAGYWKATGSDKPIIGLsGSSR 109
                 9***************************9.99***************8878899*************************************98658888 PP

         NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                 +g+kk+Lvfykg+ pkg+k dW+m eyrl
  PIN14055.1 110 IGVKKVLVFYKGKPPKGRKMDWIMTEYRL 138
                 ***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MEQNPISNTQ YPPGIRFRPS DQELITYYLQ RKVKSLPLPE NVITDIELYS YNPWDLPRKA  60
LFGDAEWYYF TPRDRKYPNG GRPNRTTEAG YWKATGSDKP IIGLSGSSRI GVKKVLVFYK  120
GKPPKGRKMD WIMTEYRLPD ASPPSRSNKS MRLDDWVLCR IQQKGNMSKN KKGNNKNSCE  180
FHKYQPKIKE HSTLFTEDSR DKLADYLLSS EIHLIASLLI GHDSGLITVP RTTFQSHKKG  240
NDLRTICEDN SGKTNTITNG PKDGASLSGQ MVTNSYCQNA YEGNEFKPSY SSNAHVNLQE  300
LDMPALYESF LQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.12e-66NAC family protein