PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN13685.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 748aa MW: 83724.5 Da PI: 6.4093 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 66.5 | 3.6e-21 | 93 | 148 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 r+k +++t+eq++e+e+lF+++++p++++r +L+k+lgL rqVk+WFqNrR++ k PIN13685.1 93 RKKYHRHTPEQIREMEALFKESPHPDEKQRLQLSKQLGLHPRQVKFWFQNRRTQIK 148 7999************************************************9877 PP | |||||||
2 | START | 211.9 | 2.3e-66 | 267 | 488 | 4 | 206 |
HHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEECTT CS START 4 eeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevissg 88 ++a++el k+a+ +ep+W +s+ e++n+de++++f +++ +s+ea+r+sg+ + +l+ lv++++d + qW+e ++ ka+t++vis+g PIN13685.1 267 NRAMDELRKMATNGEPLWIRSYetgrEILNYDEYMKEFCSEDCgkmqskKSIEASRESGIIFVDLPWLVQSFMDAN-QWKELFPclvsKAATVDVISNG 364 589***********************************9888899*******************************.********************** PP ......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHH CS START 89 ......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwl 180 ga++lm+ae q+l+p+v+ R+++fvRy++q +a +w+ivd+Svd +++ +ss+ +++++pSg++ie+ksngh+kvtwveh+++++ ++h+l PIN13685.1 365 egvnrdGAVHLMFAEIQMLTPMVAtREVYFVRYCKQISANQWAIVDISVDKVEDNI-DSSLQKCRKRPSGCIIEDKSNGHCKVTWVEHFECQKTTVHSL 462 ******************************************************98.9***************************************** PP HHHHHHHHHHHHHHHHHHHTXXXXXX CS START 181 lrslvksglaegaktwvatlqrqcek 206 +r +v+sgla+gak+w +tlq+qce+ PIN13685.1 463 YRTIVNSGLAFGAKHWISTLQQQCER 488 ************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 748 aa Download sequence |
MSLVDMSSLP NSHPKHFPSS PALSLSLAGI FRDGRAAASE EREDTVEISS ENSGPAKSRS 60 DDDYELLAEG EQVNLIDDEE DDDDNNGNKK KKRKKYHRHT PEQIREMEAL FKESPHPDEK 120 QRLQLSKQLG LHPRQVKFWF QNRRTQIKAI QERHENSLLK TEIDKLRDEN KALRDSIKKS 180 SCPNCGFATS SKDSIAGTTE EQKLRIENSR LKAEVEKLRT VIGKFPGGIS PSSSSYPSEN 240 DQENKSSLDF YTGNFGMEKS RIMDAVNRAM DELRKMATNG EPLWIRSYET GREILNYDEY 300 MKEFCSEDCG KMQSKKSIEA SRESGIIFVD LPWLVQSFMD ANQWKELFPC LVSKAATVDV 360 ISNGEGVNRD GAVHLMFAEI QMLTPMVATR EVYFVRYCKQ ISANQWAIVD ISVDKVEDNI 420 DSSLQKCRKR PSGCIIEDKS NGHCKVTWVE HFECQKTTVH SLYRTIVNSG LAFGAKHWIS 480 TLQQQCERLV FLVATNVPTK DSNGVATLAG RKSILKLAQR MTWSFCRALG ASSLNSWNKI 540 TSKTGDDIRV ASRKNLNDPG EPLGTILSAV SCVWLPVSHH ALFEFLRDEN RRKEWDIMSC 600 GSTVQSIVNL AKGQDRGNAV TTLAMKTDEQ NVWVLQDSST NAYESMVVYA PVDINGMKSV 660 MNGCDSSNIA VLPSGFSILP DGIESRPFVI TSKPEEKSTE GGSVLTIAFQ ILISNSPTAK 720 LSVDSIDSVN TLVSCTLQNI KRSLQCED |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 89 | 94 | KKKKRK |
2 | 89 | 95 | KKKKRKK |
3 | 91 | 95 | KKRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G79840.1 | 0.0 | HD-ZIP family protein |