PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN13338.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 240aa MW: 27496.6 Da PI: 4.6321 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 61.4 | 1.4e-19 | 25 | 79 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++++f++eq++ +e +Fe++ ++ +++ +LAk+lgL+ rqV +WFqNrRa++k PIN13338.1 25 KNKRRFSDEQIKSMEVMFESETKLEPKRKLQLAKELGLQPRQVAIWFQNRRARWK 79 67789*************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 116.7 | 1.4e-37 | 26 | 117 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +krr+s+eq+k++E +Fe+e+kLep+rK +la+eLglqprqva+WFqnrRAR+k+k++Ek+y++L ++y++l+++ e+L+ke+++L +l++ PIN13338.1 26 NKRRFSDEQIKSMEVMFESETKLEPKRKLQLAKELGLQPRQVAIWFQNRRARWKSKHIEKEYSVLLANYNNLASQFESLRKEKQSLLIQLQK 117 79************************************************************************************999986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
MEYSSTTESL GSLNTAVSIK KKKTKNKRRF SDEQIKSMEV MFESETKLEP KRKLQLAKEL 60 GLQPRQVAIW FQNRRARWKS KHIEKEYSVL LANYNNLASQ FESLRKEKQS LLIQLQKLKS 120 ETMGKSEDKK ENDEGQVEEN AGNMSSTDGE SDYAYKKIDF EANNVGWGCL EGGMLSDDDS 180 SIKAELLGLD DENELLKMVE PAGAADSSLT SAEDWESRLD SDDLINQPTD HSFQWWDFWS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46680.1 | 6e-45 | HD-ZIP family protein |