PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN12523.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | ERF | ||||||||
Protein Properties | Length: 212aa MW: 23262.2 Da PI: 4.358 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.4 | 3.1e-17 | 29 | 78 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +ykGVr +k +g++v+eIr p++ r r++lg+++tae+Aa+a +a +l+g PIN12523.1 29 KYKGVRKRK-WGKYVSEIRLPNS---RERIWLGSYDTAEKAARAFDASLFCLRG 78 8*****999.**********933...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MAETPPAAAR PYAAASSSNA GEPRLNEVKY KGVRKRKWGK YVSEIRLPNS RERIWLGSYD 60 TAEKAARAFD ASLFCLRGPN AKFNFPDEPP NIAGGEMLTP AEIQSVAQHY ANTYSGGSSN 120 QPQPPARPLE LEDTSPSSNS EGAGPIESID WSFLDMLDSN TEDNAGRVSD FGLYDDVYNM 180 SPHYTHDGND NDDNDDDHGD GGHVPSNFLW NF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 31 | 37 | KGVRKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G74930.1 | 1e-45 | ERF family protein |