PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN12462.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NAC

Protein Properties

Length: 351aa MW: 39391.8 Da PI: 6.4022

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN12462.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	46.2	1.4e-14	20	118	12	128
NAM 12 eelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfyk 110 ++++ + ++ + g+ l+ +v++++ y++ P++Lp+ f++ ++ ++++ g+Wka+g+ +++s +++ g ++tL +++ PIN12462.1 20 QQII-TFVNEYTPGSCLPN-NVLADASPYQYRPSNLPE------G---FWHLVNT------NEKKESVYGFWKAKGEACKIYS-DSTISGWRTTLEYFE 100 5555.55666666666555.667777777777777771......1...2222222......22334468************.999******** PP NAM 111 grapkgektdWvmheyrl 128 g+ap+g++t+W+m+ey++ PIN12462.1 101 GQAPHGQRTNWLMQEYTV 118 **************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MCPPSRPPPP TEIGLYWSDQ QIITFVNEYT PGSCLPNNVL ADASPYQYRP SNLPEGFWHL 60 VNTNEKKESV YGFWKAKGEA CKIYSDSTIS GWRTTLEYFE GQAPHGQRTN WLMQEYTVRT 120 ELSDKNKPKE LSRLLCRVFL CDGHCSKSEK SPQNCKNAIE PKKVDSVASI NPNTGITSGQ 180 DSRSESKAKR ECEEGQLPVA ANDRSIFSPE PFSEQECIAR GDYLELNDLY PESHSSSSQN 240 SSCPSKLSDE YFDSTAFLRD IEEEANKHLQ EPPSSSRHNF IASARPNDIV LQPPSSGLLL 300 SNVVEGPRPS STVRESSRPS TSHGNAESKE EKKTNSPRKK KLKFLFCFTS F

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MCPPSRPPPP TEIGLYWSDQ QIITFVNEYT PGSCLPNNVL ADASPYQYRP SNLPEGFWHL  60
VNTNEKKESV YGFWKAKGEA CKIYSDSTIS GWRTTLEYFE GQAPHGQRTN WLMQEYTVRT  120
ELSDKNKPKE LSRLLCRVFL CDGHCSKSEK SPQNCKNAIE PKKVDSVASI NPNTGITSGQ  180
DSRSESKAKR ECEEGQLPVA ANDRSIFSPE PFSEQECIAR GDYLELNDLY PESHSSSSQN  240
SSCPSKLSDE YFDSTAFLRD IEEEANKHLQ EPPSSSRHNF IASARPNDIV LQPPSSGLLL  300
SNVVEGPRPS STVRESSRPS TSHGNAESKE EKKTNSPRKK KLKFLFCFTS F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62700.1	2e-14	NAC family protein