PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN12182.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB_related | ||||||||
Protein Properties | Length: 94aa MW: 10878.4 Da PI: 10.2581 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 31.8 | 3.3e-10 | 12 | 57 | 2 | 44 |
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 g+WT++E +l+ +a +++ + +W +ar +g g++ +++k ++ PIN12182.1 12 GSWTPQENKLFEKALARFDRDtpdRWQNVARAVGGGKSVEEVKRHY 57 79*****************99************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 94 aa Download sequence |
MASSSLSSRR PGSWTPQENK LFEKALARFD RDTPDRWQNV ARAVGGGKSV EEVKRHYEIL 60 IEDLRRIESG HVPIPNYKNT SVEEEKRLLK LLKM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75250.1 | 1e-31 | MYB_related family protein |