PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN12102.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

TALE

Protein Properties

Length: 575aa MW: 63838.8 Da PI: 4.9727

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN12102.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.6	2.4e-09	373	410	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LA+++gLt +qV++WF N R + PIN12102.1 373 FEHflHPYPKDSDKIMLARQTGLTRSQVSNWFINARVR 410 664459******************************88 PP
2	BELL	128	3.4e-41	235	306	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e+qelq+k +kLls+leeVd+rY+qy++q+q+v+ssF+a+ag gsakpYtslAl++iSrhFrcL+dai +qi PIN12102.1 235 EKQELQNKMTKLLSMLEEVDRRYRQYYHQMQIVVSSFDAIAGSGSAKPYTSLALQTISRHFRCLRDAINGQI 306 689*******************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 575 aa Download sequence
MGTYVPQRNS ATMLYLRDPL PSSHSETQFP SSNMIMYTNS SSSSGPYSDA LPSDSNTLQH 60 EVLLNFGGSR DQLSTWKNDR NEMMMMQQEE GTSGVLQGLS LSLGTNVPSV LQVSNLQYNP 120 DFTMSFENED GFQNKQLRDG EYMISGVQGS NSDAANDIPA YVSVARAVPN SKYLKAAQEL 180 LDEVVNVKKA TKEQNPKKEL RKDSKNVEGE LEGGASDPSS SKASGSSPSE LSVAEKQELQ 240 NKMTKLLSML EEVDRRYRQY YHQMQIVVSS FDAIAGSGSA KPYTSLALQT ISRHFRCLRD 300 AINGQINAAR KSIGEEDAYA NDKGIGISRL RYVDQQLRQQ RALQQIGMMQ QHAWRPQRGL 360 PETSVSILRA WLFEHFLHPY PKDSDKIMLA RQTGLTRSQV SNWFINARVR LWKPMVEEMY 420 KEEAGEADID SISSSDTTQR ATKPSDDKTD HLQQGTTSTG QSKSDQVTDV EMTIRSDTNF 480 IFQSDYGIGK TKETNDPNPY DISEMERFVN VGGVSLTLGL QQCEGGANRG FVSVGEIDVY 540 NTAGSGMGNE TAEFECIDSG NRSHQFVSSL LPSFT

Sequence ? help Back to Top

Protein Sequence Length: 575 aa Download sequence

MGTYVPQRNS ATMLYLRDPL PSSHSETQFP SSNMIMYTNS SSSSGPYSDA LPSDSNTLQH  60
EVLLNFGGSR DQLSTWKNDR NEMMMMQQEE GTSGVLQGLS LSLGTNVPSV LQVSNLQYNP  120
DFTMSFENED GFQNKQLRDG EYMISGVQGS NSDAANDIPA YVSVARAVPN SKYLKAAQEL  180
LDEVVNVKKA TKEQNPKKEL RKDSKNVEGE LEGGASDPSS SKASGSSPSE LSVAEKQELQ  240
NKMTKLLSML EEVDRRYRQY YHQMQIVVSS FDAIAGSGSA KPYTSLALQT ISRHFRCLRD  300
AINGQINAAR KSIGEEDAYA NDKGIGISRL RYVDQQLRQQ RALQQIGMMQ QHAWRPQRGL  360
PETSVSILRA WLFEHFLHPY PKDSDKIMLA RQTGLTRSQV SNWFINARVR LWKPMVEEMY  420
KEEAGEADID SISSSDTTQR ATKPSDDKTD HLQQGTTSTG QSKSDQVTDV EMTIRSDTNF  480
IFQSDYGIGK TKETNDPNPY DISEMERFVN VGGVSLTLGL QQCEGGANRG FVSVGEIDVY  540
NTAGSGMGNE TAEFECIDSG NRSHQFVSSL LPSFT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16400.1	1e-119	TALE family protein